Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1210 ATGGAGGGAAGAGAAGGTGGTACTAACAGTGGGATTACGGTGGTGGGATCGGATGCTCCGGCAGAGTACCATGTAGCTCACAGGGCTGAAAACGCTGCTCCGGCTGCTGGATCCACCGTTTTGACAGCAGTTCCGGCAGCTCAAGGCGGGGCTCCGTCGATGCAGCCGGTGAAGAAGAAGAGAGGTCGGCCGAGAAAGTACGCACCAGATGGGTCAGTGACCATGGCGTTGTCTCCCAGGCCAATATCTTCTTCAGCTCCGCCGTCACTGCCGCCGGTGATTGATTTCTCGGCGGAGAGGCGCGGGAAAGTGCGACCAGTTAGCTCTGTCAGCAAAACCAGATTTGAGGTGGAGAATATAGGTGAATGGGTATCATGCTCGGTTGGTGCTAATTTTACACCTCATATCATCACTGTTAATTCCGGAGAAGATGTTACTATGAAGATAATATCGTTTTCTCAACAAGGGCCACAAGCTATATGCATTCTTTCTGCAAATGGAGTAATATCAAGTGTCACACTACGTCAACCTGATTCTTCTGGAGGCACATTGACATATGAGGGACGGTTTGAAATTCTATCTTTATCTGGCTCATTCATGCCAAATGACAGTGGCGGTACACGGAGCAGATCAGGTGGCATGAGTGTTTCTTTAGCAAGTCCTGATGGTCGTGTTGTAGGTGGTGGCGTAGCTGGTCTATTGGTCGCTGCTGGTCCTGTGCAGGTAGTGGTAGGCAGTTTCCTGGCAAGTAACCAACATGAGAAGCCAAAGAAACATAAACTGGAGACATTATCAACAGCAACACCAACTGCAGCTGTTCCTGTGTCTATTGCTGATCCGGTAACTGTTCTGTCGTCTTCATCTTCGTTCCGGGCAGATAATTGGTCTGTGGTTCCAGTAGCGACGGATACCAGGAATAACACAACTGATATTAATGTCTCACTCCCTGGAGGCTAA 957 0.4953 MEGREGGTNSGITVVGSDAPAEYHVAHRAENAAPAAGSTVLTAVPAAQGGAPSMQPVKKKRGRPRKYAPDGSVTMALSPRPISSSAPPSLPPVIDFSAERRGKVRPVSSVSKTRFEVENIGEWVSCSVGANFTPHIITVNSGEDVTMKIISFSQQGPQAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAAGPVQVVVGSFLASNQHEKPKKHKLETLSTATPTAAVPVSIADPVTVLSSSSSFRADNWSVVPVATDTRNNTTDINVSLPGG 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1210 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 316 IPR039605 GO:0003680
Lal23g1210 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 316 - -
Lal23g1210 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Lal23g1210 318 Gene3D - 134 271 - -
Lal23g1210 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 256 - -
Lal23g1210 318 CDD DUF296 133 224 IPR005175 -
Lal23g1210 318 ProSiteProfiles PPC domain profile profile. 129 270 IPR005175 -
Lal23g1210 318 MobiDBLite consensus disorder prediction 44 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1210 Lal-Chr23 13374921 13379696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1210 7 315 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 60.819 9.39e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1210 - - mdm:103405981 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1210 23 13374921 13379696 Lal23g1210 23 13374921 13379696 ECH