Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1205 ATGAGAAGACACACTCACATTCACCTCTCTCATCCTCTATTGTGTGCCATTTTTTGTTTCCTTTCATCTCTCACTGTATCACCAGAAGGAATTGAGAAAGAGATTTTGCTTCAATTCAAGGACAACATCACAGATGATCCCTTCAACAGTTTGGGTTCATGGGATTCAAGTGGAAACCCTTGCAATTACAGTGGCGTTTCGTGTAATTCGGAAGGGTTTGTAGAAAGAATTGTTCTCTGGAACACTAATTTGGCTGGAGTGTTGTCCCCAGCTTTGTCAGGGTTGAAGAGATTAAGGATATTGACATTGTTTGGGAATCGCTTCTCGGGCAATTTCCCAGCAGAATATGCTGATCTTCACTCATTGTGGAAGATCAATGTGAGCTCCAATTTATTATCAGGTCCAATCCCAGAGTTCATAGGTGATTTGCCCAGCATTCGCTTTCTAGATTTATCAAAGAATGGCTTCACCGGGGAGATACCTTCAGCTTTGTTTAGGTACTGCTACAAAACCAAGTTTGTTTCTCTTTCAAACAACAATCTTTCTGGTCCAATTCCTGAATCATTAGTGAATTGCTCTAACCTTGAAGGATTTGATTTTTCCTCCAACAATTTGAGTGGGGTTCTCCCATCGCGACTTTGTGATATTCCAAGGTTGTCATGTGTATCACTGAGAAGCAATGCCCTATCAGGGAGTGTGCAGGAGCACATTTCGGCGTGTCAAAGCTTGAAACTTTTGGATCTTGGTAGTAATAGATTCACTGGTTTTGCCCCATTCAGCATCCTCAGAATGCAAAATGTAACCTATTTCAATATATCCTATAATGGGTTTACAGGGCAGATTGCTGATATCACTGACTGCAGTGAGAGTTTAGAAATCTTTGATGCTTCGGGAAATTATTTGGATGGGGAGATTCCCTCGAGCATAACTAGATGCAAGAGCTTAAAGGTCTTGGGCTTGGAGCTGAATAAGCTGAAAGGGAGTATCCCAATGGATATTCAGAACTTGCAAAGACTATTAGTCATCAGATTGGGGAATAATTCAATAGGTGGAACAATTCCCCAGGGTTTTGGCAATATTGAGCTCCTTGAAGTTCTGGATTTGCACAATCTAAACCTTGTTGGCGGAATTCCAGTTGATATAGACAATTGCAGATTTCTTATTGTACTGGATGTTTCTGGTAATAACTTAGAGGGTGAGATTCCTAAGACCCTTTACAACCTCACAAACCTGGAGGCCTTTGACCTACATCAAAACCAGTTCAATGGAAGCATCCCGCCGAGCCTAGGAAACCTTTCAAGGATCCAATACCTAGACCTGTCACATAATTCAATTTCTGGTTCAATTCCTCCCTCCCTTGGAAATTTAAGGAACTTAACACATTTTAATCTCTCATTCAATAATCTCTCTGGTATCATTCCTCAAATTGCAACCATACAGCATTTTGGTCCATCTACATTTTCTAATAATCATTTGCTTTGTGGTGCTCCTTTGGATACTGCTTGCACAGAAAATGGAAATGAATCACCTTCAGCTCCTAGGATGGGTGAGACAAAAGTTCTAAGTGTCTCTGCGATTGTTGCAATTGTGGCTGCAGCTGTAATTCTTACAGGGGTTTATATGGTGACCATCATGAGTATCAGGGCTCGTAGTCGGAAAAAAGACGATGATCAAATTATGATTGTTGAGAGCAGCACAACCGTTGGATCATCAGAATCAAATGTTATAATTGGAAAGTTGGTTCTATTCAGCAAAAGTTTACCATCAAAGTATGAAGATTGGGTGGCGGGTACCAAAGCATTACTTGACAAAGAGTCTATTATAGGTGGTGGATCAATTGGCACAGTATACAGAACTGATTTTGAAGGTGGTATCTCAATTGCAGTGAAGAAGCTTGAGACTCTGGGAAGGATGAGAAACCAGGAAGAATTTGAACATGAAATCGGGCAACTAGGCAACATTCAACACCCTAATTTAGTTGGTTTTCAAGGTTACTATTTGTCCTCTTCAATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGGGAATCTCTACGAAAATCTACATGGAATTGGCTATCCAGGATCCAGCACTAGCAGAGGCAATAGGGAATTAAATTGGTCTAGAAGGTACCAAATTGCACTTGGAACCGCAAGAGCCATTGCCTATCTCCACCATGATTGTAGACCTCCGATTCTTCATCTCAACATTAAATCCTCTAACATACTCTTAGATGACAAGTATGAAGCTAAGTTGTCTGATTACGGGTTAGGAAAGTTACTTCCCATTTTGGACAATTATGGTTTGACCAAGTCTCACAATTCTGTTGGATATGTTGCACCAGAGTTGGCTCAAAGCCTGAGGCAGAGTGAGAAGTGTGATGTATACAGTTTTGGGGTAATTCTTTTGGAGCTGGTAACCGGGAGAAAGCCCGTAGAAAGCCCGTCATCAAGTGAGGTGGTGGTTTTGTGTGAATATGTAAGAGGTTTGTTGGAGACTGGCTCAGCTTCAAATTGCTTTGATAGAAAATTACTGGGGTTTTCTGAGAATGAACTAATTCAGGTTATGAAATTGGGTCTAATTTGTACTACAGAGGATCCTTTAAGGAGACCAAGTATTGCTGAGGTGGTGCAGGTCCTTGAGTCCATTAGAAATAGATTGGAATCACATTAA 2673 0.4082 MRRHTHIHLSHPLLCAIFCFLSSLTVSPEGIEKEILLQFKDNITDDPFNSLGSWDSSGNPCNYSGVSCNSEGFVERIVLWNTNLAGVLSPALSGLKRLRILTLFGNRFSGNFPAEYADLHSLWKINVSSNLLSGPIPEFIGDLPSIRFLDLSKNGFTGEIPSALFRYCYKTKFVSLSNNNLSGPIPESLVNCSNLEGFDFSSNNLSGVLPSRLCDIPRLSCVSLRSNALSGSVQEHISACQSLKLLDLGSNRFTGFAPFSILRMQNVTYFNISYNGFTGQIADITDCSESLEIFDASGNYLDGEIPSSITRCKSLKVLGLELNKLKGSIPMDIQNLQRLLVIRLGNNSIGGTIPQGFGNIELLEVLDLHNLNLVGGIPVDIDNCRFLIVLDVSGNNLEGEIPKTLYNLTNLEAFDLHQNQFNGSIPPSLGNLSRIQYLDLSHNSISGSIPPSLGNLRNLTHFNLSFNNLSGIIPQIATIQHFGPSTFSNNHLLCGAPLDTACTENGNESPSAPRMGETKVLSVSAIVAIVAAAVILTGVYMVTIMSIRARSRKKDDDQIMIVESSTTVGSSESNVIIGKLVLFSKSLPSKYEDWVAGTKALLDKESIIGGGSIGTVYRTDFEGGISIAVKKLETLGRMRNQEEFEHEIGQLGNIQHPNLVGFQGYYLSSSMQLILSEFVPNGNLYENLHGIGYPGSSTSRGNRELNWSRRYQIALGTARAIAYLHHDCRPPILHLNIKSSNILLDDKYEAKLSDYGLGKLLPILDNYGLTKSHNSVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPSSSEVVVLCEYVRGLLETGSASNCFDRKLLGFSENELIQVMKLGLICTTEDPLRRPSIAEVVQVLESIRNRLESH 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1205 890 Gene3D Ribonuclease Inhibitor 171 505 IPR032675 -
Lal23g1205 890 PANTHER - 13 888 - -
Lal23g1205 890 SUPERFAMILY Protein kinase-like (PK-like) 603 881 IPR011009 -
Lal23g1205 890 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Lal23g1205 890 Pfam Leucine rich repeat 389 445 IPR001611 GO:0005515
Lal23g1205 890 Gene3D Ribonuclease Inhibitor 30 170 IPR032675 -
Lal23g1205 890 SUPERFAMILY L domain-like 108 498 - -
Lal23g1205 890 Gene3D Transferase(Phosphotransferase) domain 1 679 890 - -
Lal23g1205 890 SMART LRR_typ_2 143 167 IPR003591 -
Lal23g1205 890 SMART LRR_typ_2 456 479 IPR003591 -
Lal23g1205 890 SMART LRR_typ_2 408 432 IPR003591 -
Lal23g1205 890 SMART LRR_typ_2 336 359 IPR003591 -
Lal23g1205 890 Coils Coil 873 890 - -
Lal23g1205 890 PANTHER UNNAMED PRODUCT 13 888 - -
Lal23g1205 890 Gene3D Phosphorylase Kinase; domain 1 569 678 - -
Lal23g1205 890 Pfam Protein kinase domain 604 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1205 890 ProSiteProfiles Protein kinase domain profile. 602 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1205 890 CDD STKc_IRAK 608 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1205 Lal-Chr23 13348642 13352050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1205 32 889 Receptor kinase-like Gene Family AT1G62950 65.672 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lal23g1205 Pkinase 2.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1205 - - gmx:100800970 1392.87