Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1192 ATGGAGAATGTGTTTGATGTCAATCACTTGGACGCTGATGTTCTTTTGCCCCCTCGGAAGCGTCTTCTTGCTGGATTGAAAAAACAGAGCCCAGATGGTCATGCTGCTGTCTCTCCATCTGTGGTCGCTGGTTCTTATGTTACTATTTCTGAGGCTGTTTCCTCGTCCTCCTTTTCAAGTGAGTTTGAAACCCGACTAAAAAATTTGTTGGCTTCTCATTCAAATAACCCTAATCTCACTCCTGAGGAAGTCGTGGAGGCCTCAAAAGCAGCAGCGGTGGCTGCAACACGGACTGCCAAGGCTGCAAGAGCCACAGCAGAAGAAAAAGCTGAAATAGCAGCCAAAGCAGTTGCTGCAGCCAAGTGTGCGTTAGATTTGGCTGCATCTTTCTCTGGAGAGGGTGTCAGCCAGGAAAGAAATCTGAAAAAGAACAAGCTGAAGAAGCATCTCCCTGTTCAGCTCTTGTACAAAAAAAATCAACTGATTGAAAATTGTGGGACGGATGAAGAATTGGCCCGTAAGTTACATCGAGCCATGAATAGTTCTCCTAGAATCTCGAAGAACTCTCCAAATTCAGGTTCAAAAGGCAGTAAGCACAAGAAGCCTAAAAGCTCTTCAAGTTTTGAAACAACTGATGGCTCTGATGGCAGTATGGCATCTAGACAAGATTGCTTATCTTTGAACAATGGGCATGCAGTAGCGGGCAAAATTGATTCTGAAGGCTCCATTCAAGAAGTATGCTCAAGTAAGGAAGCTAAGAAGGGATCTAGATATGATAGGTCTAACCAAATGGAGATAGGTAATGGAGAAGCAGAGTCAAGCCGGTCAAAGGAGAAAAACACTGCAGATTTGTCTCCCATAGGAAAGAAGAGAGGAAGGGTGAAGCTGAAGAAGTTGCCCTTAAGCATTTGCACCTCGAAAGATAGGGCACAGCCAAAAGAAGTTATAAGAGCTAGAAGTTCTCCATTGACTGAAATGAGACAAGGCAATGGCCCCGTTGATAGAAGTTCTCCTTTGTTTCCAGCGGAGCCATCCACTGAGAGAGTGATGCCAATTGAGGCTACATCAATGTGGAAATGCCAGGAATTCAAGACACCCGCTTGTATCAAACAAAATAAAGCTGTGCAAGCCAAGTCAAAGAATTTTAAGGAACCAGATATTATGATTATAGGATTGAAATCAACCAGTGAAGAGAAGTCAGAGTTTTCACCTATATTGAGGTCTGGATGCTGTTCTGAGAAAGGACCAAAGCAGTATATGGAGGATGAATTCATCTGTGTTGATATTCTCGGTGAACATGTTGGTGGAGGAGAAGACCTTCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGGCATGGTGGTATTGATGCAGCGTCATTTGTCAAAAATAACATCCTTAAGTTTATAATGGAAGACTCTCAGTTCCCCTCAGGCACTAAGAAAGCTGTTAAGAATGCCTTTGTGAAGGTTGATCATGCATTTAAAGATGCTAGTGCTCTTGATAGTTCTTCGGGCACCACTGCTCTCACAGCCCTTGTGTTGGGAAGGGTCATGCTAATTGCCAATGCAGGAGATTCTCGTGCTGTATTAGGAAAAAGGGGCAGAGCTCTCGAACTTTCTAAAGACCATAAACCAAATTGCACTTCAGAAAGATTAAGAATTGAGAAACTAGGTGGTGTGATCTATGATGGATACCTCAATGGACAACTATCGGTGGCTCGTGCTCTTGGAGATTGGCACATCAAAGGTTCCAAAGGTTCTAAAAGCCCCTTAAGCTCAGAGCCAGACTTGGAAGAGATTGTTCTGACAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGTCAGTGTGCAGTAACAATGGTAAGGAAGGAACTCATGCAACATAATGATCCTACAGAATGTGCAAAGGGACTTGTGAATGAGGCGCTTCAACGCAACACATGTGACAATCTAACAGTTTTGATAGTTTGTTTCTCCAAAGATCCACCTCCTAAGATTGAAATTCCTAAATCACATAGGAGGAGAAGTATTTCAGCTGAAGGCCTTGATCTTCTCAAAGGTGTCTTAAATGGAAGATGA 2106 0.4311 MENVFDVNHLDADVLLPPRKRLLAGLKKQSPDGHAAVSPSVVAGSYVTISEAVSSSSFSSEFETRLKNLLASHSNNPNLTPEEVVEASKAAAVAATRTAKAARATAEEKAEIAAKAVAAAKCALDLAASFSGEGVSQERNLKKNKLKKHLPVQLLYKKNQLIENCGTDEELARKLHRAMNSSPRISKNSPNSGSKGSKHKKPKSSSSFETTDGSDGSMASRQDCLSLNNGHAVAGKIDSEGSIQEVCSSKEAKKGSRYDRSNQMEIGNGEAESSRSKEKNTADLSPIGKKRGRVKLKKLPLSICTSKDRAQPKEVIRARSSPLTEMRQGNGPVDRSSPLFPAEPSTERVMPIEATSMWKCQEFKTPACIKQNKAVQAKSKNFKEPDIMIIGLKSTSEEKSEFSPILRSGCCSEKGPKQYMEDEFICVDILGEHVGGGEDLPSPAAFYGVFDGHGGIDAASFVKNNILKFIMEDSQFPSGTKKAVKNAFVKVDHAFKDASALDSSSGTTALTALVLGRVMLIANAGDSRAVLGKRGRALELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPDLEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPTECAKGLVNEALQRNTCDNLTVLIVCFSKDPPPKIEIPKSHRRRSISAEGLDLLKGVLNGR 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1192 701 MobiDBLite consensus disorder prediction 178 222 - -
Lal23g1192 701 MobiDBLite consensus disorder prediction 207 222 - -
Lal23g1192 701 CDD PP2Cc 407 667 IPR001932 -
Lal23g1192 701 ProSitePatterns PPM-type phosphatase domain signature. 446 454 IPR000222 GO:0043169
Lal23g1192 701 PANTHER PROTEIN PHOSPHATASE 2C 381 689 IPR015655 GO:0004722|GO:0006470
Lal23g1192 701 SUPERFAMILY PP2C-like 400 668 IPR036457 -
Lal23g1192 701 SMART PP2C_4 397 665 IPR001932 -
Lal23g1192 701 MobiDBLite consensus disorder prediction 247 291 - -
Lal23g1192 701 Gene3D - 391 671 IPR036457 -
Lal23g1192 701 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 381 689 - -
Lal23g1192 701 MobiDBLite consensus disorder prediction 271 290 - -
Lal23g1192 701 Pfam Protein phosphatase 2C 409 659 IPR001932 -
Lal23g1192 701 MobiDBLite consensus disorder prediction 324 345 - -
Lal23g1192 701 ProSiteProfiles PPM-type phosphatase domain profile. 407 667 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1192 Lal-Chr23 13258509 13266808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1192 390 699 PP2C-type Phosphatase Gene Family AT3G51470 77.097 1.35e-177 507
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0362 16 2179833 2182582 Lal23g1192 23 13258509 13266808 LSH
Lal15g0303 15 2031007 2033026 Lal23g1192 23 13258509 13266808 LSH