Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1185 ATGTGCAATAAATCAAACCCAACGCATGTTCCTCAAAATTCTAGCACACAGAAGCTTGAGACTGTAAACATGTATGTGACACGACCACCATCACCATTATTACTTTCTTCTTCTAATGCTGTTGAGAATGCTTCTCTTCGGTATAATTATATAGCAGATGAATCATCACCCTCTTTAGATCCATATGGCATTGGTGTGGAAGAAGAAGGTAATAACATGTTGCCTTTGCACATTAACGTTTCTTCAGATCCATATGCCATCACTACAGCACCACCACCACCATCACCGGTGCCGGAGAATGAAGAGGAGGTTGAGCTTGAAGATCTCCCGCTACCTTTCCCTTACCCCGAAGCAGAACAAGGGGCAAATCAGATACCTTTTGAGACATCCACCATCTTGGTGAAGCCGAATAAGAATATAATAAAGAAACTAGTAAAATTTGCACAAAAGCAAGGGCTTTTCATCTTAGGAGCGAATGGTACTGTATCCTTGGTTGAACTTCTTAATGATGAAGATGCACCAGTGGCAAAAACCACTTTGCAGGGAACATTTGAGATTATGTTACTGGATGGAAATATTGTAATTCCCAAAAATAATAGGGAAGTTAGTTGGTTAACTATTTTAATGGCTGGAAAGGATTCTCAGATTAAAGGAGGACCTGTAAAGCGCTTAATTGCTGGATCCAATGTTCAGATTGTGGTGGCCCCATTGAATGAATTTAATGCAGAATCCATGTCAATGCAACAATATTTGAGAAGACCAGAGTTTACCCATTTCCCAAACTATAGGCATCGAGATTGGCTCACAAAGGAAGTAGTGAGTCACATTCATAAGGCAACGTTGAAGGAGCTGAATAATCAAATAACAAACACACTTGCATGA 882 0.4002 MCNKSNPTHVPQNSSTQKLETVNMYVTRPPSPLLLSSSNAVENASLRYNYIADESSPSLDPYGIGVEEEGNNMLPLHINVSSDPYAITTAPPPPSPVPENEEEVELEDLPLPFPYPEAEQGANQIPFETSTILVKPNKNIIKKLVKFAQKQGLFILGANGTVSLVELLNDEDAPVAKTTLQGTFEIMLLDGNIVIPKNNREVSWLTILMAGKDSQIKGGPVKRLIAGSNVQIVVAPLNEFNAESMSMQQYLRRPEFTHFPNYRHRDWLTKEVVSHIHKATLKELNNQITNTLA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1185 293 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Lal23g1185 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 237 IPR005175 -
Lal23g1185 293 CDD DUF296 134 237 IPR005175 -
Lal23g1185 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 242 - -
Lal23g1185 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 127 236 IPR039605 GO:0003680
Lal23g1185 293 Gene3D - 130 251 - -
Lal23g1185 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 127 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1185 Lal-Chr23 13211002 13214975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1185 125 235 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 29.310 5.55e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1185 - K03499 lang:109330792 356.295