Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1181 ATGGAGTTTGAACCTCTGAGTATGGGTAACGACGTTATTGAATTTGATATGATTGGTCTGGGGGATGATGCTGGCATTGACATTGAGCACCCAGTTGATGATGATGATGATGATGATGACCTTGTTAGCGGTTACGATGTTCCTATATATACTGGTACTTCCAGTGTAGGTGCCACTATGGGACCTTATATCCCTGGATTGGACACAAATCTTGAACCATATCAGGGTATGGAGTTTGAATCAGAAGAGGCTGCTAAGGCCTTTTATAATTCCTATGCTCGTCGTGTTGGTTTTAGTACTAGAGTGAGCATGTCTCGCCGCTCCAGGCGTGACGGTGCTATAATTCAGAGGTCTTTTGTGTGTGCCAAAGAAGGGTTCCGTGCAGAGAAAGAGAAGAATTCTCTTGATGGAAGAGTCAAGAGGCCTCGTGCTGAAACCCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGATTCTGGCAGTTGGGTTGTTTCTTCATTTGTCAAGGAACATAACCATGAACTGGTTCCTCCAGATAAGGTGCATTGCCTTCGCTCTCACCGCCATGTTTCTGGTCCAGCTAAGTCGTTGATTGATACTTTGCAGGGTGCTGGTATAGGGCCCAGTGGAATTATGTCTGCACTTATCAAAGAATACGGTGGAATTAGCAATATTGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGGAGCAGTAGGCAAAGGACACTTGGAGGTGACACTCAAATCCTCTTGGATTACTTGAAGAGCAAACAAGCAGGGAATCCTTCATTTTTCTTCGCCGTACAGGGTGATGAAGATCATTGCATGAGTACTATCTTGTGGGTCGACCCTAAGGCAAGGACTAACTACACTTACTTTGGTGACACTGTAACCTTTGACACTACATATAGGTCAAACCGCTATAGATTGCCTTTTGCACCTTTCACTGGTGTAAATCATCATGGACAACCTGTATTATTTGGTTGTGCTTTTCTTGTAAATGAATCTGAGGCATCTTTTATATGGCTCTTCAAAACCTGGCTTGAAGCAATGTCAGGGCGACCTCCAGTTTCAATTACTACTGATCATGACAGGGTGATTCGTGCAGCCATCAACCATGTCTTTCCTGATACCCGACATCGCTTCTGCAAGTGGCACATTTTTAAAGAATGCCAAGAGAAGTTATCTCATGTGCTTTCCAAACACCATAATTTTGAACCTGATCTCCATAAATGTGTTAACTTGACAGAGTCCATTGAGGAGTTTGAGTCTTGCTGGTCCTCTCTAATTGACGGTTATGATCTCCGAGAACATGAATGGCTCCAAAATATTTATGGTGATAGGTGGCAGTGGGTTCCAGTGTACTTGAGGGACACATTTTTTGCGGAAATGTCAATAACACAACGAAGTGATAGCATTAACTCTTACTTTGACGGATATATCAATGCATCAACAACACTTCAGGTTTTTGTTAAGCAATATGAGAAGGCTTTGGAAAGCCGTTATGAGAAAGAAGTCAAAGCTGATTATGACACAATAAACACTGCTCCCGTTCTGAAGACTCCATCACCCATGGAGAAACAGGCAGCTGGAGTTTACACAAGAAGATTGTTTGTCAAATTTCAAGAAGAGTTGGTTGATACATTAACTTTCTTGGCGAACAAAGTAGAAGAAGAAGAAATGATTGCCACATATAGAGTAGCCAAATATGGGGAAATTCATAAGTCCTACATTGTCAAATTTAATTTTCTTGAGGCGAAAGCTACTTGCAGTTGCCAGATGTTTGAGTTTTCGGGTCTAGTCTGTAGACATATATTGACTGTTTTTAGGGTGAAAAATCTTCTTACTTTACCACATCATTATATTTTAAAAAGGTGGACCAGGAATGCTAAAAGTGGGGTCATATTTGATGTACGTACTACTGATTTGTTAAATGGTGCTCAAGAATTTCTAACTATCCGATACAATAATCTTCGCCAAGAGGCCCTTAAGTTTGTTGATGAGGGAGCAAGCTCTCTGAGAGTCTATGAAGTGGCTATGAGTGCTCTTCAGGAGGCTGCAAATAAAGTGTCACATGCGACAAAGAGTGGTGGAAAACTGGTTATATCAAATGGAACTTGTAAAGAAGACCTTCATCAGAACAATGACGCAACTACAAATTGCTGTGATTCTCAATTCGATACACAGCAATCTTCATCTAAGGATGACCAGGACAGAACAATTGAAAAGTTGACACGTCAACTTGACCGAGTTCGAAGGAAGTGTGAAGGTTATAGGTCGAACTTGCTGTCAATTTTAAAAGATATTGAAGAGCAGAAGCTAGAATTATCAGTTAAAGTCCAAAATATTAAGCTGGGAATGAAGGATTGA 2379 0.4119 MEFEPLSMGNDVIEFDMIGLGDDAGIDIEHPVDDDDDDDDLVSGYDVPIYTGTSSVGATMGPYIPGLDTNLEPYQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRAEKEKNSLDGRVKRPRAETRVGCKAMLVVKIQDSGSWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAGNPSFFFAVQGDEDHCMSTILWVDPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLVNESEASFIWLFKTWLEAMSGRPPVSITTDHDRVIRAAINHVFPDTRHRFCKWHIFKECQEKLSHVLSKHHNFEPDLHKCVNLTESIEEFESCWSSLIDGYDLREHEWLQNIYGDRWQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQVFVKQYEKALESRYEKEVKADYDTINTAPVLKTPSPMEKQAAGVYTRRLFVKFQEELVDTLTFLANKVEEEEMIATYRVAKYGEIHKSYIVKFNFLEAKATCSCQMFEFSGLVCRHILTVFRVKNLLTLPHHYILKRWTRNAKSGVIFDVRTTDLLNGAQEFLTIRYNNLRQEALKFVDEGASSLRVYEVAMSALQEAANKVSHATKSGGKLVISNGTCKEDLHQNNDATTNCCDSQFDTQQSSSKDDQDRTIEKLTRQLDRVRRKCEGYRSNLLSILKDIEEQKLELSVKVQNIKLGMKD 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1181 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 766 IPR031052 GO:0006355
Lal23g1181 792 ProSiteProfiles Zinc finger SWIM-type profile. 580 616 IPR007527 GO:0008270
Lal23g1181 792 Pfam MULE transposase domain 300 392 IPR018289 -
Lal23g1181 792 Coils Coil 737 764 - -
Lal23g1181 792 SMART 26again6 591 618 IPR006564 GO:0008270
Lal23g1181 792 Pfam SWIM zinc finger 588 615 IPR007527 GO:0008270
Lal23g1181 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 47 766 - -
Lal23g1181 792 Pfam FAR1 DNA-binding domain 88 179 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1181 Lal-Chr23 13182473 13186653 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal23g1181 MULE 5e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1181 - - gmx:100782414 1318.91