Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1180 ATGACCATTGATATGCCACCAACAATGGCCCAAAGTGTGAGAACAAACAGATCTTCCTTTAGCTCAAGCAATGGCAATGGGGATAATACCCCTTTACACAGTTATGCTTCATTTAGTAATGGTGATGACTATGACAGTGATACCCTCAATTTTGCACCACCCACACCTTCGAGTTTATCGATGGCTATTCCAGCAGAACTCGCTGGAGCTATACCCTTGATCGATAGATTCCAGGTGGAAGGATTTTTAAAACTGATGCAAAAACAAATTCATTCTGCTGGGAAACGTGGACTTTTTTCTAGAAGATCTGTGGGGCCCCAAGTTCGAGAGAGATTTACAATTAAGGACATGCTTTGCTTCCAGAAGGATCCAATACCAACATCGTTGCTTAAGTTAAATGGCGATTTGGCAAGCCGGGCAACAAAATTGTTCCAAATAGTTTTGAAATATATGGGAGTAGATTCATCTGATCATGTAACTCCAATAGGATTAGATGAACAAGTTGAGCTTGTAGGTAAACTGTACAAGCAAAGTTTGAAATGTTCAGAACTCCGAGATGAACTTTTTGTACAGATATCAAAACAAACAAGAAATAACCCTGAGAGGGAATGCTTGATTAAAGCATGGGAGCTATTGTACTTGTGTGCATCCTGCATGCCTCCTAGTAAAGATATTGGAGTATATCTGTCAGAATATGTTCATAATGTGGCACATGGCGTGACTATCGATCCTGAGATTCGAACCCTTGCATTAAATGCATTAAATGCTTTGAAACGCTCGGTCAAAGCTGGTCATAGGCATACAATACCTGGGCCTAAAGAGATTGAAGCTCTGTTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCTTGGATGAAACATTTGAAGAGATTACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCTGGGATCATTAAGCTGACAACATACTCTAGCTTCAGCCTGTTTGAGTGCCATAAGGTTTTAAGTGGTTCCAAGTCAACTGATTCTGCGAATGAGGAGTACACTGGGCTAGATGATAATAAATATATTGGGGATCTCCTGTCGGAATTTAAGGCAGCAAAAGATCGAAATAAGGGAGAAATTTTGCATTGTAAACTGATATACAAGAAAAAGCTATTTCGCGAATCAGATGAAGCCGTGACAGAGCCAATGTTTGTGCAGTTATCATATGTACAATTACAGCATGATTATATTTTGGGTAATTATCCTATTGGAAAGGATGATGCTTCCCAGCTATCTGCATTGCAAATCTTGGCTGAGATAGGATTTGTTAGAAGACCTGAATCATGCACTGACTGGAATTCATTTCTGGAGCGATTTCTGCCTAGACAAATTGCAATGACACGAGGAAAACGGGAATGGGAATTGGACATTCTTTCTTGCTATCACTCACTGGAGCATCTGACAAAAGATGATGCAAGGCAGCAATTTCTTCATATTCTGAGAACACTTCCATACGGGAATTCTATTTTCTTCAATGTTCGTAAGATTGATGATCCTATTGGACTTCTCCCTGGACGAATAATATTGGGAATTAATAAGAGAGGGGTTCATTTTTTCCGCCCAGTTCCCAAAGAATACATGCATTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAACACAGCGGTATTTTTTAAAATGAGAGTTGCAGGTGCTCTTCACATTTTCCAATTTGAAACCAAACAGGGAGAAGAAATTTGTGTAGCTCTTCAAACCCATATAAATGATGTAATGTTGCGCCGCTATTCCAAAACACAGCCTTCTGCTCCTGATTCTTTACATGAGGATATTTCTAGTAATTTTAAGCCCCCAGATTTGGAATCAGATGAGAAGCGTGTTAAAGATTTGTCTAAACTTGTTGAAGAGTCTCAAAGAAATGCCGATCAATTGCTAGAACAATTGCATGAGAAGCAAAAGGAGGAAGAGAAAATGCTTGGAGAATTGGAGCACTTGAAAGAATCCTTAAACGCTGATAAGCATAGTCTTGCAGAAATTACAAATGACCGTGATAGGCTAAGATCATTATGTGATGAAAAAGACATGGCACTTCAGACTACAATTCTAGAGAAAAAGATCATGGAAGCAAGGATGGCCAAGTTGACTAATCTGGTGATAGAAAATACTACCAAAAAGGATATTGTTGGAGCAAATAGCCAAGCCTTACAAAAGCTTGAAGATGGGCTAAAATTTTGTAAGGACGAGCTGCTTGTAGCTGAAGATACTATCAAAATCTTAACAAATGAAAAATTGATTTTGGAACAAAAGCTGTTTGAGCTTGAGAAGAAGAATGCAGAAGAGACAAGTTCTATTCAACGGAAACTTGAGCAAGAACGCCAAATTCTGAAGTCTCAAGTGCACGATCTTGAAAGAAAGCTTGAAACTTTCAGACAAGAATTATTTGCATCTGAGTCTACACTTACCGTCAAGGACACTGAATTGGATGCATTGAAGAAAAATTTAAGAGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAACGAACAAACAGCTTCGATATTGAAGATGCAAGGGGCTCAGCTAGCTGAATTTGAAGTGCTTTATAAAGAAGAACAGGTTCTAAGAAAGCGATATTTTAATATGATCGAAGATATGAAAGGCAAGATAAGAGTTTACTGTCGGGTAAGACCTCTTAGTGGAAAGGAGATAGTAGAGAAAGAAGGAAATGCTCTTACTACTGTAGATGAGTTTACAGTTGAACATCTCTGGAAAGATAATAAACCAAAACAGCAGATGTATGATCGGGTGTTTGATGGCGATGCTAGTCAACAAGATGTGTTTGAGGATACAAAGGCAAGTCTTAATGGTTATAATGTCTGCATATTTGCCTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTACGGATCCGAAAACAATCCTGGGCTTACCCCGCGTGCCACTGCTGAACTTTTTAAGATTTTAAGGAGAGATAGTAACAAGTTTTCTTTTTCCTTGAAGGCATACATGTTGGAGTTATATCAAGATACACTTGTGGATCTTCTGTTACCTAAGAATGCAAAGCGTTTAAAATTGGATATCAAGAAGGATTTAAAGGGAATGGTAACTGTGGAAAATGTAACAACTGTGTCTGTTCCTACATTGGAAGAATTGAATATCATAATACAGAAAGGATCTGAACGGCGACATACGTCAGGGACACAAATGAATGATGAAAGTTCAAGATCTCACCTCATACTATCAATTGTAGTTGAAAGTACCAACCTTCAAAGTCAATCAGCTGCTAGGGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTAAAAAAGTCAGGCTCTGAAGGTAGTCAACTTAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCATTAGGAGATGTTATTAGTGCTTTGGCTTCTGGTGGTCAACACATACCTTATAGGAATCACAAGTTAACCATGTTAATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTTATGTTTGTAAATGTATCTCCAGCAGAATCAAACTTGGATGAGACACACAACTCTCTTATGTATGCATCAAGAGTGAGATCAATAGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAGCTAGACTGAAGAAACTGGTTGCATATTGGAAAGAGCAAGCTGGTAGAAAAGGGGAAGATGAAGATTTAGAAGAAATTCAAGAAGAACGACCAACTAAAGATAAGACTGGCGGATGTAATGAGATCTCACAAGCTCCAAGATCTCACAGGCTTTAA 3828 0.3848 MTIDMPPTMAQSVRTNRSSFSSSNGNGDNTPLHSYASFSNGDDYDSDTLNFAPPTPSSLSMAIPAELAGAIPLIDRFQVEGFLKLMQKQIHSAGKRGLFSRRSVGPQVRERFTIKDMLCFQKDPIPTSLLKLNGDLASRATKLFQIVLKYMGVDSSDHVTPIGLDEQVELVGKLYKQSLKCSELRDELFVQISKQTRNNPERECLIKAWELLYLCASCMPPSKDIGVYLSEYVHNVAHGVTIDPEIRTLALNALNALKRSVKAGHRHTIPGPKEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLTTYSSFSLFECHKVLSGSKSTDSANEEYTGLDDNKYIGDLLSEFKAAKDRNKGEILHCKLIYKKKLFRESDEAVTEPMFVQLSYVQLQHDYILGNYPIGKDDASQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRGKREWELDILSCYHSLEHLTKDDARQQFLHILRTLPYGNSIFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGALHIFQFETKQGEEICVALQTHINDVMLRRYSKTQPSAPDSLHEDISSNFKPPDLESDEKRVKDLSKLVEESQRNADQLLEQLHEKQKEEEKMLGELEHLKESLNADKHSLAEITNDRDRLRSLCDEKDMALQTTILEKKIMEARMAKLTNLVIENTTKKDIVGANSQALQKLEDGLKFCKDELLVAEDTIKILTNEKLILEQKLFELEKKNAEETSSIQRKLEQERQILKSQVHDLERKLETFRQELFASESTLTVKDTELDALKKNLRELEELREMKEDIDRKNEQTASILKMQGAQLAEFEVLYKEEQVLRKRYFNMIEDMKGKIRVYCRVRPLSGKEIVEKEGNALTTVDEFTVEHLWKDNKPKQQMYDRVFDGDASQQDVFEDTKASLNGYNVCIFAYGQTGSGKTFTIYGSENNPGLTPRATAELFKILRRDSNKFSFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDLKGMVTVENVTTVSVPTLEELNIIIQKGSERRHTSGTQMNDESSRSHLILSIVVESTNLQSQSAARGKLSFVDLAGSERVKKSGSEGSQLKEAQSINKSLSALGDVISALASGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRKGEDEDLEEIQEERPTKDKTGGCNEISQAPRSHRL 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1180 1275 SMART kinesin_4 892 1219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 CDD FERM_C_KCBP 501 605 - -
Lal23g1180 1275 SUPERFAMILY Second domain of FERM 382 499 IPR035963 -
Lal23g1180 1275 MobiDBLite consensus disorder prediction 1 37 - -
Lal23g1180 1275 PANTHER KINESIN-RELATED 615 1259 IPR027640 GO:0003777|GO:0007018
Lal23g1180 1275 PRINTS Kinesin heavy chain signature 962 983 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 PRINTS Kinesin heavy chain signature 1081 1098 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 PRINTS Kinesin heavy chain signature 1112 1130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 PRINTS Kinesin heavy chain signature 1161 1182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 CDD KISc_C_terminal 892 1213 - -
Lal23g1180 1275 Coils Coil 787 814 - -
Lal23g1180 1275 SUPERFAMILY PH domain-like 504 592 - -
Lal23g1180 1275 Coils Coil 622 674 - -
Lal23g1180 1275 Gene3D MyTH4 domain 98 281 IPR038185 -
Lal23g1180 1275 Pfam MyTH4 domain 173 277 IPR000857 GO:0005856
Lal23g1180 1275 Coils Coil 822 859 - -
Lal23g1180 1275 Gene3D Kinesin motor domain 881 1213 IPR036961 -
Lal23g1180 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1240 IPR027417 -
Lal23g1180 1275 Gene3D - 396 497 IPR014352 -
Lal23g1180 1275 ProSiteProfiles MyTH4 domain profile. 120 279 IPR000857 GO:0005856
Lal23g1180 1275 Coils Coil 744 783 - -
Lal23g1180 1275 MobiDBLite consensus disorder prediction 1237 1260 - -
Lal23g1180 1275 CDD FERM_B-lobe 399 497 IPR019748 -
Lal23g1180 1275 MobiDBLite consensus disorder prediction 1237 1275 - -
Lal23g1180 1275 Gene3D - 283 387 - -
Lal23g1180 1275 Pfam Kinesin motor domain 900 1211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 ProSiteProfiles FERM domain profile. 284 598 IPR000299 GO:0005856
Lal23g1180 1275 SUPERFAMILY Prismane protein-like 837 898 IPR011254 GO:0003824|GO:0016491
Lal23g1180 1275 Pfam FERM central domain 390 502 IPR019748 -
Lal23g1180 1275 ProSiteProfiles Kinesin motor domain profile. 894 1211 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1180 1275 Gene3D - 1214 1261 - -
Lal23g1180 1275 Gene3D - 502 608 IPR011993 -
Lal23g1180 1275 SMART B41_5 280 504 IPR019749 -
Lal23g1180 1275 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 615 1259 - -
Lal23g1180 1275 MobiDBLite consensus disorder prediction 601 626 - -
Lal23g1180 1275 ProSitePatterns Kinesin motor domain signature. 1111 1122 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal23g1180 1275 SMART MyTH4_1 120 279 IPR000857 GO:0005856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1180 Lal-Chr23 13174593 13183667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1180 35 1260 Calmodulin-binding Proteins AT5G65930 71.186 0.0 1779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1180 - - gmx:100785619 2016.89