Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1178 ATGATCTTTGGCAAAATCGCTAGAGCCATATCCAACAACAACTTACGAATTTCTTCCTCTCTTCAGGATCTCTCCTCATTCCGCAACCTCGATCTCGAACATGCCCATGATGTCACTATTGATCCTCTCGCTGTTCCCACCTATTTGAAGCAACCCCTTTATGCCCCTGCCCCTAAAGCTTCAATCTTTTCTTCTCGCAGGAACTGGGTCAGGCCGATTAAGCTTGCACTCTCTCTCACACTCTTTATTTTTATAATGTACGTGATTTTCATGCTTTTTTATTCTTATTGGAATCATGGGTCTGGTAAGTACTATGTTGTGCTTGATTGTGGTAGTACTGGGACTAGAGTTTATGTTTATCATGCTTTTATTGAATATAAGAAATATAGTACTCTTCCAATAGCTGTGAAATCGTTGAATAATGGTGTGAAAAATAAATCTAGTTCTCTGAGGGGGCGTGCTTATGATAGAATAGAAACTGAACCTGGACTTGATAAGTTAGTGCAGAATGTGTCTGGATTGAAAGGTGCATTGAAACCATTAATTAGATGGGCAGAGAGGAAAATTCCAAAGCATGCTCATAGGAGCACTGCTCTGTTCCTTTACGCTACCGCTGGTGTTCGGAGGCTTCCCGGAAGTGACTCTAAATGGCTTCTAGATAATGCCTGGTCTGTGTTAAAGGATTCTCCTTTTGTATGCCAAAAGGATTGGGTTAGGATTATATCTGGTACTGAGGAAGCTTATTTTGGATGGATATCACTTAATTATTATAGTGGCATCTTAGGGGTTAGGCCTAGGAAGGCAACTTATGGAGCACTTGACTTAGGTGGCTCGTCGTTGCAGGTTACCTTTGAGAGTGATCAACAGCTGAATAGCGAGACTAGCTTGTATGTTAGGATTGGATCAGTGAATCATCATCTCACAGCGTATTCGCTGTCTGGTTATGGTCTCAATGAGGCATTTGATAAATCTGTGGTACATCTTTTTAAGAAAGAATTTGGATCCACCAATATATCTAATAAAAAGGTAGTGCTCAAACATCCTTGCTTGCAGTCTGGGTACAAGAACCAATACATGTGCTCTCATTGTTCTTCCAATAACAAAGAAGGTGGAAGTCATGCTATTAATGGGAAATTATTGGGCAATAAAGGGGAATCAGGAACTCCGGTGGTGCTTTTTGGTGCTCCGAATTGGCAAGAATGCAGTGCACTCGCCAAAGTTGCTGTCAATTTGTCTGAATGGTCTGATTTCAGTCGAGGACTTGATTGTCAGGTGCAACCTTGTGCTTTGCGTGATAATCTCCCTCGTCCATATGGCCACTTTTTTGTGATTTCTGGATTTTATGTGGTGTATCGTTTTTTCAACTTGACTTCTGAAGCCACACTCGATGATGTATTGGAAAAGGGTAGGGGTTTCTGCGAAAAAAGATGGAATGTTGCAAAGGAAAGTGTTCCTCCTCAGCCCTTTATTGAGCAGTACTGCTTTAGGGCACCATACATTGCCTCACTGCTGAGAGAGGGTTTGCACATTACTGATAACCAAATAACTATTGGTTCTGGAAGTATCACTTGGACTCTTGGGGTTGCCTTGTTGGAAGCTGGAAAGGCATATTCCACTCCATTTGGGCTTCACAGTTTTGAATTGTTCCAGATGAAGATAAATCCACTTATTCTTATTCCCATTTTGCTGCTTTCTATTATTCTCCTTCTTTGTGCTTTATTATGTGCTGGCAATTGGATGCCAAGCTTTTTCCGGAGGCAATATCTTCCCATTTCCAGGCATAAAAATGTTTCCAGTGCTTCTGGCCTCAATATCCCATCTCCTTTTCGGTTCCAAAGATGGAGTCCTATCAACTCTGGAGATGGAAGAACAAAGATGCCACATAGCCTAACAGATGTATGTTCCCGAGGAAGCCCATTAGGCCTGGGGCATGGTGTCAGTGATAATGGTAGTGGCATCCAGCTTATGGAGTCTTCCTTGTACCCATCAGCCAGTAGTGTCTCGCATAGTTATTCCTCAAACAATTTAGGGCAGATGCAGTTTGACAATAGTAATTTAGGCTCGTTTTGGTCCCCCAACAGAAGTCAGATGCATCTTCAGAGTAGGAGATCACAATCTCCAGAAGACCTGAATTTGTTGGTGGCAGAAGCACATCTGGTGAAGCTTTAG 2169 0.4219 MIFGKIARAISNNNLRISSSLQDLSSFRNLDLEHAHDVTIDPLAVPTYLKQPLYAPAPKASIFSSRRNWVRPIKLALSLTLFIFIMYVIFMLFYSYWNHGSGKYYVVLDCGSTGTRVYVYHAFIEYKKYSTLPIAVKSLNNGVKNKSSSLRGRAYDRIETEPGLDKLVQNVSGLKGALKPLIRWAERKIPKHAHRSTALFLYATAGVRRLPGSDSKWLLDNAWSVLKDSPFVCQKDWVRIISGTEEAYFGWISLNYYSGILGVRPRKATYGALDLGGSSLQVTFESDQQLNSETSLYVRIGSVNHHLTAYSLSGYGLNEAFDKSVVHLFKKEFGSTNISNKKVVLKHPCLQSGYKNQYMCSHCSSNNKEGGSHAINGKLLGNKGESGTPVVLFGAPNWQECSALAKVAVNLSEWSDFSRGLDCQVQPCALRDNLPRPYGHFFVISGFYVVYRFFNLTSEATLDDVLEKGRGFCEKRWNVAKESVPPQPFIEQYCFRAPYIASLLREGLHITDNQITIGSGSITWTLGVALLEAGKAYSTPFGLHSFELFQMKINPLILIPILLLSIILLLCALLCAGNWMPSFFRRQYLPISRHKNVSSASGLNIPSPFRFQRWSPINSGDGRTKMPHSLTDVCSRGSPLGLGHGVSDNGSGIQLMESSLYPSASSVSHSYSSNNLGQMQFDNSNLGSFWSPNRSQMHLQSRRSQSPEDLNLLVAEAHLVKL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1178 722 Gene3D - 96 242 - -
Lal23g1178 722 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 77 694 IPR000407 GO:0016787
Lal23g1178 722 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 77 694 - -
Lal23g1178 722 Gene3D Exopolyphosphatase. Domain 2 243 519 - -
Lal23g1178 722 Pfam GDA1/CD39 (nucleoside phosphatase) family 100 531 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1178 Lal-Chr23 13163316 13168642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1178 13 722 Nodulin-like Gene Family AT4G19180 58.496 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1178 - - adu:107487370 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0379 16 2281396 2288038 Lal23g1178 23 13163316 13168642 LSH
Lal23g1178 23 13163316 13168642 Lal16g1775 16 16802571 16806851 PCT
Lal16g1775 16 16802571 16806851 Lal23g1178 23 13163316 13168642 PCT