Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1177 ATGGCATCAGTTTCAGGATCAGTAGGGGGTGAAGTATGGAAAGCCCATTTAGCCATGGCACTGGTGCAGCTCTTCAATGGTGGCTACCATGTTATTACCAAAGTAGCCCTTAATGTTGGTATTAACCAATTAGTCTTCTGCCTCTTCAGAGATCTCATTGCCCTTTCTATCCTTGCTCCCTTTGCTTATATCCGTGAAAAACGGACACGGCCACCCATTACTAAAAGCCTCCTGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATCGGTTTAAGCTACACTAATCCAACTTATGCTTCCGCTATACAGCCAGCCATTCCAGTCTTTACATTTGTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTTCTCAGATATGAAGGTTGGGCAAAGGTTGGAGGTACTCTTATCTGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATACAGAAATTGACCATGAATCACTAAGTGAAATAAGTGCCAGAGGTCAGCCAGAGCCTACTGCGTGGTTAATCAGTGGTTTACAAGATCTTGGACTAGACCATTTTCATATTGGGGTTCTGTGCTTAATAGGGAACTGCATGTGCATGGCTACTTTTCTAGCCATCCAGACACCAGTGTTAAAGAAGTATCCCTCAAACCTCTCTGTTACAGCATATTCATACTTCTTTGGAACTGCACTGATGGTGACAGTGTCACTATTCATGACTCACGAGTCAACCAACTGGAGTTTGACGCGATCAGAAATACTTGCTGTTATTTATGCTGGAACCATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAACTTTGGTTGCTCTTTATAATCCACTTCAACCTGGGTTTTCAACCCTCCTGTCCCTAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGGGGATCTTTTATCATAGCTGGTCTATACACTGTTACATGGGCATCTAGTAGAGAAAGACATGCAACTGTTGGAGTTATTCCTCATAATGTGTCATGGGTATCAGAATCACTTATTCATGAAAAGAATGCATACCAGAAAGCAACAGGTTCAGGAACAGAAGCAGTACTAGTTAGAAATGGTGGTGATAGATGGAAGGCACATATGGCCATGGCACTAGTTCAGATATTCTATGGAGGCTACCATGTTATCACCAGAGTGGCCCTTAATGTTGGTATCAATCAACTTGTCTTCTTTGTCTATAGGGATCTCATTGCACTTTCTATTCTTGCTCCCCTAGCTTTTTTTCATGACAGACGGATACGACTTCCTATTACCAAGGACCTTCTGATTTCATTCTTCTTGCTTGGCTTAATTGGGGTATTTGGGAACCAGCTATTGTTTATTATTGGTTTAAGCTATACTAATCCAACCTATGCTTCTACCATACAATCAGCACTTCCTGTATTTACATTTCTATTTGCAGTAATGATGGGTACAGAAAGAGTGAACTTGCACAGATATGAAGGTTGGGCAAAGGTTGGAGGAACTCTTATCTGTGTTTCTGGTGCCATATTTATGGTTTTGTATCATGGTCCAGCTTTGATAGGATACACAGAAAGTGTTCATGTAGCACAGAGTGAAAGAAGTGCCAGAGCTAAGGCAAAATCCTTCTATTTGGTTTATCAGTGGTTTAGAGAATCTTGGGTTAGACCATTTTCATCTTGGGGTTATTTGCTTGATACTGATTAG 1773 0.4129 MASVSGSVGGEVWKAHLAMALVQLFNGGYHVITKVALNVGINQLVFCLFRDLIALSILAPFAYIREKRTRPPITKSLLMSFFFLGLTGIFGNQLLFLIGLSYTNPTYASAIQPAIPVFTFVLAVMMGTERVNFLRYEGWAKVGGTLICVSGAILMVLYRGPALIGYTEIDHESLSEISARGQPEPTAWLISGLQDLGLDHFHIGVLCLIGNCMCMATFLAIQTPVLKKYPSNLSVTAYSYFFGTALMVTVSLFMTHESTNWSLTRSEILAVIYAGTIASALNYGLITWCNKILGPTLVALYNPLQPGFSTLLSLIFLGSPIYLGSIIGGSFIIAGLYTVTWASSRERHATVGVIPHNVSWVSESLIHEKNAYQKATGSGTEAVLVRNGGDRWKAHMAMALVQIFYGGYHVITRVALNVGINQLVFFVYRDLIALSILAPLAFFHDRRIRLPITKDLLISFFLLGLIGVFGNQLLFIIGLSYTNPTYASTIQSALPVFTFLFAVMMGTERVNLHRYEGWAKVGGTLICVSGAIFMVLYHGPALIGYTESVHVAQSERSARAKAKSFYLVYQWFRESWVRPFSSWGYLLDTD 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1177 590 PANTHER WAT1-RELATED PROTEIN 391 559 IPR030184 GO:0016021|GO:0022857
Lal23g1177 590 PANTHER WAT1-RELATED PROTEIN 13 375 IPR030184 GO:0016021|GO:0022857
Lal23g1177 590 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 346 - -
Lal23g1177 590 SUPERFAMILY Multidrug resistance efflux transporter EmrE 428 536 - -
Lal23g1177 590 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Lal23g1177 590 Pfam EamA-like transporter family 395 534 IPR000620 GO:0016020|GO:0016021
Lal23g1177 590 Pfam EamA-like transporter family 203 340 IPR000620 GO:0016020|GO:0016021
Lal23g1177 590 Pfam EamA-like transporter family 15 156 IPR000620 GO:0016020|GO:0016021
Lal23g1177 590 PANTHER WAT1-RELATED PROTEIN 13 375 - -
Lal23g1177 590 PANTHER WAT1-RELATED PROTEIN 391 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1177 Lal-Chr23 13153943 13161820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1177 390 555 Nodulin-like Gene Family AT3G45870 65.060 1.10e-65 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1177 - - gmx:100787738 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1177 23 13153943 13161820 Lal23g1177 23 13153943 13161820 ECH