Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1170 ATGGAAATACCAAGTACCATGTTTTCCTTGTTTGTTTCTTTTCTTTTCATTCTTGTTCTTTTCAAAACATTCATAAAACTTTTTGTCTCCAAACTACAACACTTGCCACTTCCACCTGGCTCCATGGGATATCCTTACATAGGAGAAACATTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCACAAAAATAAAAAGGTATGGTTCTATCTTCAAATCCCACATTTTAGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCTGCAAAATTTGTGCTCAATAAAGCTCATCTATTCAAGCCAACATTCCCAGCAAGTAAAGAGAGGATGTTAGGAAAACAAGCTATCTTTTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAGACTTGTACTTCGTACCTTTATGCCTGAAGCCATCAAAAACATTGTTCCTGCAATTGAATCTATTGCCCAAGATTGTCTCAAATCATGGGAAGGACGTGAAATATTCACTTTCCTAGAAATGAAGACGTTCACCTTCAATGTTGTCCTACTTTCAATATTTGGAAAAGAAGAAGTTAAGTATAGAGAGGATCTGAAAAGGTGTTACTACACTCTTGAGCAAGGGTACAATTCAATGCCAATTAACCTTCCTGGAACACTGTTCAACAAGGCTATGAAGGCAAGAAAGGAACTTGCACAGATTGTAGCACAGATAATCTCAAAGAGGAGGCAAGAGCAACAAGATTACAAGGACTTGTTGGGTTCATTCATGGAAGAGAAAGCAGGGCTCACAGATAAACAGATAGAAGATAATGTAATTGGTGTCATATTTGCAGCGCGTGACACCACTGCCAGTGTCCTTACATGGATTATTAAGTACCTTGGTGAAAACCCTAGTGTCCTACAAGCTGTAACTGAGGAGCAAGAATCTATATTAAAGAGCAAAGAAGAAAGTGGTGAAGAGAAGGGTTTGATTTGGGAAGATACCAAAAAGATGCAAATAACTTCAAGGGTTATACAAGAGACTCTAAGAGTTGCTTCAATTTTGTCCTTTACTTTTAGAGAAGCAGTGGAAGATGTTGAGTATCAAGATTCTGTGTTTGGAATTTTGTTTTCCTTAGGGCATCTTATACCAAAGGGATGGAAAGTACTACCACTATTCAGAAATATACACCATAGTCCAGACAACTTCAAAGAGCCAGAGAAGTTTGATCCCTCAAGATTTAAGGCTGCACCAAAACCCAATACTTTCATGCCATTTGGCAGTGGGATCCATGCATGTCCAGGGAATGAATTAGCCAAATTGGAGATGCTAGTGCTTCTACATTATCTGACTACAAAGTACAGGTGGTCTATGGAGAGTGCAAAGAATGGAATCCAATATGGCCCTTTTGCTCTTCCCCAAAATGGCTTACCTATTACATTATATCCCAAAGAAGTAGATAGCACAGAGAAAAAGACAGATCCATATCCAACAAGTGCTATTATGGAAACTTTCTAA 1491 0.3836 MEIPSTMFSLFVSFLFILVLFKTFIKLFVSKLQHLPLPPGSMGYPYIGETFQMYSQDPNVFFATKIKRYGSIFKSHILGCPCVMISSPEAAKFVLNKAHLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPAIESIAQDCLKSWEGREIFTFLEMKTFTFNVVLLSIFGKEEVKYREDLKRCYYTLEQGYNSMPINLPGTLFNKAMKARKELAQIVAQIISKRRQEQQDYKDLLGSFMEEKAGLTDKQIEDNVIGVIFAARDTTASVLTWIIKYLGENPSVLQAVTEEQESILKSKEESGEEKGLIWEDTKKMQITSRVIQETLRVASILSFTFREAVEDVEYQDSVFGILFSLGHLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFKAAPKPNTFMPFGSGIHACPGNELAKLEMLVLLHYLTTKYRWSMESAKNGIQYGPFALPQNGLPITLYPKEVDSTEKKTDPYPTSAIMETF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1170 496 Pfam Cytochrome P450 38 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 Gene3D Cytochrome P450 28 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 SUPERFAMILY Cytochrome P450 34 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Lal23g1170 496 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1170 496 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 13 473 - -
Lal23g1170 496 PANTHER CYTOCHROME P450 26 13 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1170 Lal-Chr23 13087371 13090217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1170 1 446 Cytochrome P450 AT5G45340 72.036 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1170 K09843 - gmx:100170674 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1170 23 13087371 13090217 Lal23g1170 23 13087371 13090217 ECH
Lal16g0388 16 2344045 2346878 Lal23g1170 23 13087371 13090217 LSH
Lal15g0329 15 2218951 2221658 Lal23g1170 23 13087371 13090217 LSH
Lal23g1170 23 13087371 13090217 Lal16g1777 16 16829832 16833881 PCT
Lal16g1777 16 16829832 16833881 Lal23g1170 23 13087371 13090217 PCT