Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1165 ATGGAGGGCACAAGAATAGGCCAATGGTTAAACCTTCTAGTAGTATGTGCACTGCTATTACTGAAGACAGAAGCTTCTTCTTATGTACCAATTACTTATGTTCAGAACGCTGTAGCGAAAGGAGCCGTTTGTTTGGATGGGAGTCCTCCAGCTTATCATTTTGATAAGGGATTTGGTGTAGGGATTAATAATTGGTTACTTCAATTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTTCTCGAAAGTACAATCGTTTAGGTTCATCCAAGCAAATGGCAAAACAAATTGCCTTTTCAGGAATCTTAGGTAACAAGCACCAGTTCAATCCAGATTTCTACAATTGGAACAGAATTAAGGTTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTGGAAGCAGTAAATCCTGTAACCAAGTTGCACTTCAGAGGAGCAAGGGTTTTTACTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAAAGCTATTATATCTGGATGTTCAGCTGGAGGATTGACTTCAATATTGCATTGCGATCGCTTTCGAGCTCTATTACCTACACGGGCAAATGTTAAATGCATCTCGGACGCTGGTTTCTTTATCAATGCAAGGGATGTCTCTGGAACACGACACATTGAACAGTTCTTTAGTCAGATTGTTGCAACACATGGATCTGCTAGGAATTTGCCTCCATCATGCACTTCAAGACTCAGCCCAGGGCTGTGCTTTTTCCCGCAATATTTTGTATCGCAAATTTCTACACCAATCTTCCTTATAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCGTGGCCATTGGCATAGCTGCAAGCTTGATATAAACAACTGTTCATCCAATCAACTTGGTACAATGCAAGGCTTCAGGACTGAATTCTTAAGGGCATTGACTGTGCTAGGGAACTCTCAATCTAAAGGAATGTTTATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAGGAGACATGGTTTAGAAGTGACTCTCCACTGCTGGCCAAGACAACAATTGCAAAGGCAGTAGCAGACTGGTTCTATGATCGAAGGCTTTTCCATAAGATAGATTGTCCTTACCCTTGCAATCCAAGTTGCCACAACCGAATTTTTGATCCAAGGCATGACAACCCTGGAATATAG 1209 0.4194 MEGTRIGQWLNLLVVCALLLLKTEASSYVPITYVQNAVAKGAVCLDGSPPAYHFDKGFGVGINNWLLQFEGGGWCNNVTTCLSRKYNRLGSSKQMAKQIAFSGILGNKHQFNPDFYNWNRIKVRYCDGASFTGDVEAVNPVTKLHFRGARVFTAVIEDLLAKGMKNARKAIISGCSAGGLTSILHCDRFRALLPTRANVKCISDAGFFINARDVSGTRHIEQFFSQIVATHGSARNLPPSCTSRLSPGLCFFPQYFVSQISTPIFLINAAYDSWQIKNILAPGVADPRGHWHSCKLDINNCSSNQLGTMQGFRTEFLRALTVLGNSQSKGMFIDSCYAHCQTEMQETWFRSDSPLLAKTTIAKAVADWFYDRRLFHKIDCPYPCNPSCHNRIFDPRHDNPGI 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1165 402 PANTHER NOTUM-RELATED 3 396 IPR004963 GO:0016787
Lal23g1165 402 PANTHER PECTIN ACETYLESTERASE 3 396 - -
Lal23g1165 402 SUPERFAMILY alpha/beta-Hydrolases 146 274 IPR029058 -
Lal23g1165 402 Pfam Pectinacetylesterase 24 373 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1165 Lal-Chr23 13053370 13057821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1165 5 400 Carbohydrate Esterase AT4G19420 61.717 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1165 K19882 - gmx:100776478 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1165 23 13053370 13057821 Lal23g1165 23 13053370 13057821 ECH
Lal16g0395 16 2386450 2395244 Lal23g1165 23 13053370 13057821 LSH