Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1161 ATGTTCAGTGGTGGAGGTGACGACGCACTCGCAGCACGCCTCGGCATTGTGCCGCCGTCGCTGCTGAATCATACAACGCCGTCGTTGATATCGCCGGAGATATCGGCGTCTCTAGCTGCGAGGGAGGAGAGGGGTCCGTCTCAAACGCAGTGGAGCCAGCAAGAGACGATGGAGTTCATAGCGATTCGAGCGGAGCTAGAGAGAGATTTCACTGCGTCGAAGAGGACCAAGACACTTTGGGAAGTAGTGAGTTCGAAGATGAGAGAGAGAGGGTTCAGGAGGAGCCCTGAGCAGTGCAAATGTAAGTGGAAGAACCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAGGCAATGCCCATTTTTTGAAGAATTGCATGCAATCTTTACCCAAAGAGCACATAACATGCAACGGTTGCTTCTAGAATCCGAGACTCGTTCAACTCAGCCAAAGAAAGTGGTGAAAAGAGTAAGTGGAGATCGGTCCTCTGAGGAATTCTCAGAAGATGATGATGAGGTGGAAGAGAATAGTGAAGAGGAGAAACCTGCTAGAAGCAATACCCGCAAAAGGAAACTCGACAAGGTTGCAATGGAGAAGTATTCAAAGGCAAACAATCCATCAAATTCCCTCAATAATACTACCAGTAGTGTTCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGCTAAGGATGGAGATGCAATGGGGGGAGATGATGGAAAGGCGTGCCCATGAAAGGGAGCTGTTTGAACAGGAATGGAGGCAGTCCATGGAGAAGCTTGAGAGGGAGAAACTGATGATTGAACATGCATGGAGGGAGAGGGAAGAACAGAGGAGAATTAGAGAAGAGAGCCGGGCAGAGAGGAGGGATGCTTTATTGACAACCCTTTTGAACAAACTCATTCATGAATCTAACTAA 933 0.4812 MFSGGGDDALAARLGIVPPSLLNHTTPSLISPEISASLAAREERGPSQTQWSQQETMEFIAIRAELERDFTASKRTKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFTQRAHNMQRLLLESETRSTQPKKVVKRVSGDRSSEEFSEDDDEVEENSEEEKPARSNTRKRKLDKVAMEKYSKANNPSNSLNNTTSSVQEMLKEFFQHQLRMEMQWGEMMERRAHERELFEQEWRQSMEKLEREKLMIEHAWREREEQRRIREESRAERRDALLTTLLNKLIHESN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1161 310 MobiDBLite consensus disorder prediction 183 198 - -
Lal23g1161 310 Pfam Myb/SANT-like DNA-binding domain 49 133 IPR044822 -
Lal23g1161 310 CDD GT1 50 114 - -
Lal23g1161 310 PANTHER - 48 308 - -
Lal23g1161 310 Gene3D - 51 112 - -
Lal23g1161 310 PANTHER - 48 308 - -
Lal23g1161 310 SMART sant 47 109 IPR001005 -
Lal23g1161 310 MobiDBLite consensus disorder prediction 146 198 - -
Lal23g1161 310 ProSiteProfiles Myb-like domain profile. 43 107 IPR001005 -
Lal23g1161 310 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1161 Lal-Chr23 13035139 13037365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1161 31 310 Trihelix Transcription Factor Family AT2G38250 42.254 3.47e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal23g1161 Myb_DNA-bind_4 2.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1161 - - lang:109330481 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1161 23 13035139 13037365 Lal23g1161 23 13035139 13037365 ECH