Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1149 ATGGAAAGGTATAACCTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGACGAGTGTGTAAACCTGCGAGAAGTCAAGTCATTACGAAAGATGAACCACCCAAATATCGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTTTGTACTTTGTTTTTGAGTATTTGGAACGCAACCTATATCAACTTATGAAAGACAGGCAAAAACTCTTTTCCGAAGCTGAAGTAAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGTGACATGAAGCCTGAAAACTTGCTGGTTACCAAGGATATAATCAAAATTGCTGATTTTGGTCTAGTCCGAGAGATCAGTTCACAACCACCCTACACAGAGTATGTCTCTACACGATGGTATCGTGCTCCTGAAGTGCTGCTCCAGTCTTATCTCTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTCTCTCTCCGTCCTCTTTTTCCGGGTGTCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTTATAGGCAGCCCAACAACTGAATCATGGGCTGATGGACTCAAACTAGCAAGAGATATTAACTATCAATTTCCACAGCATGCTGGTGTACAGCTTTCTGTATTGATTCCATCTGCAGGTGCTGATGCAATCAGCCTTATCACATCACTTTGCTCATGGGATCCTTGCAAGAGGCCAACAGCTTCAGAGGCTCTCCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCGTCCCTCCGCACCAGAGCGGTAGCGAGAGCTCCTCCATCTGCTGGAACCAGGGGAGCATTGGATCTGCAAGGGGTCAGGAGATATTCCGGTGCTTTACCTAATTCAAAGCTCACCAACAATTTTACTTCCCCAAAATTACATCCTCCTTTAGCTTCAGGTGTCCAACGGAAGCTGGATATTGTAAATCAGGATGGAATTAAGAATGATAAGTCGATGAAAACTACAAGGCAACCAAAATATCGTCCACCAGGAAAGGACAGCCCAACGTCAATGAACAAAGGGAGGAGTGGACGTGGTGTTTTGGAAACTGCTGAGAAGTTAGGGAATATGTCTGTTGGTACCCGAAGACAATCGATGGGACAACGTCCTCCTCCTCCTCCAATGAAGACTGGAGTCAATTGGATTCCTGAATCTAGAAACTTCATGCTCAGGTCCACTCAACAGATTCCAACTGGAAGAACTTTCACAAGAAAAGTTGCAGGATGA 1359 0.4364 MERYNLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWDECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYLERNLYQLMKDRQKLFSEAEVRNWCFQVFQGLAYMHQRGYFHRDMKPENLLVTKDIIKIADFGLVREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQHAGVQLSVLIPSAGADAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVARAPPSAGTRGALDLQGVRRYSGALPNSKLTNNFTSPKLHPPLASGVQRKLDIVNQDGIKNDKSMKTTRQPKYRPPGKDSPTSMNKGRSGRGVLETAEKLGNMSVGTRRQSMGQRPPPPPMKTGVNWIPESRNFMLRSTQQIPTGRTFTRKVAG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1149 452 CDD STKc_MAK_like 4 283 - -
Lal23g1149 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lal23g1149 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 384 - -
Lal23g1149 452 Gene3D Transferase(Phosphotransferase) domain 1 84 288 - -
Lal23g1149 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lal23g1149 452 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 384 - -
Lal23g1149 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1149 452 MobiDBLite consensus disorder prediction 327 418 - -
Lal23g1149 452 MobiDBLite consensus disorder prediction 353 371 - -
Lal23g1149 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1149 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lal23g1149 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1149 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1149 Lal-Chr23 12949145 12955349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1149 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 3.11e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lal23g1149 Pkinase 7.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1149 K08829 - gmx:100810150 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0359 15 2413612 2419894 Lal23g1149 23 12949145 12955349 LSH