Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1147 ATGTTTACATGCATATCTTGTACGAAACAAACAGCAGAAGAAAAGGAAGAAGAAGAAGAAGGGCGTGAGAGTGGCACGCCAAGAACAGCCGTCAAAAGCCTCACAACACAGATCAAGGATATGGCACTGAAGTTTTCAGGCGCTTATAAGCAGTGCAAACCTTGCACAGGGTCCAGCAGTACCTATAAGAAAGGACAAAGACCATATCCTGACTTTGACACCATTTCGGAAGGGGTTCCATACCCCTATATTGGAGGTGCAAGCTCAAGCTCAACTCCTGCTTGGGACTTTACAAGCTCCAATCATCCTGGTGGTAGATATATGGGGGGATTCGGTGGTGACAGAGGTCGTGATTCAACAGCATCGTTGTCGGTCTGTGATGTGGTGTTGGAAGATGAGGGTGAAGCTAAGGAGTGGATGGCACAAGTGGAGCCAGGGGTGCACATTACCTTTGTGTCTCTACCAAATGGGGGAAATGACCTTAAGAGAATTAGATTCAGCCGGGAGATGTTCAATAAATGGGAGGCTCAAAAATGGTGGGGTGAAAATTACGACCGAATCATGGAACTTTACAATGTGCAGAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGATCTGAGGATGAGCCAAGAGATTCTTCTTACTCCAGATTGACATCTGCAAGAGAGAGCCCCATGACCTCATCGTTGAACAAGGATTGGACACCGCGGAGTCACTATAAACCCTCAGCAAGCAGAGGGTATAACCCCACTGAACCTTGTAATCAAAGCCGCGGGGTAGAATTTCATGCAGGATCATCAATGGAAGCATCAAGGACAACCACCTCTTCTAGAGATGAGCCTTCAATTAGCAATGCCAGTGAGATAGAGGCCGAATGGATCGAAGAAGATGAACCTGGAGTCTACATTACACTCAGGCAATTAGCCGATGGCACAAGGGAGCTTAGGCGTGTGAGGTTCAGTCGGGAAAAATTTGGAGAGGTACATGCAAAGAATTGGTGGGAAGAAAATAGGGAGAGAATACAAGCTCAGTACCTTTGA 1044 0.4665 MFTCISCTKQTAEEKEEEEEGRESGTPRTAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSTYKKGQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNHPGGRYMGGFGGDRGRDSTASLSVCDVVLEDEGEAKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWEAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEPRDSSYSRLTSARESPMTSSLNKDWTPRSHYKPSASRGYNPTEPCNQSRGVEFHAGSSMEASRTTTSSRDEPSISNASEIEAEWIEEDEPGVYITLRQLADGTRELRRVRFSREKFGEVHAKNWWEENRERIQAQYL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1147 347 Pfam Transcription factor regulating root and shoot growth via Pin3 291 346 IPR013591 -
Lal23g1147 347 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Lal23g1147 347 MobiDBLite consensus disorder prediction 10 26 - -
Lal23g1147 347 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 347 IPR044532 -
Lal23g1147 347 MobiDBLite consensus disorder prediction 10 32 - -
Lal23g1147 347 MobiDBLite consensus disorder prediction 218 285 - -
Lal23g1147 347 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Lal23g1147 347 Pfam Transcription factor BRX N-terminal domain 30 55 IPR027988 -
Lal23g1147 347 ProSiteProfiles BRX domain profile. 292 347 IPR013591 -
Lal23g1147 347 MobiDBLite consensus disorder prediction 201 285 - -
Lal23g1147 347 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1147 Lal-Chr23 12939424 12948765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1147 1 347 Major Intrinsic Protein MIP AT1G31880 67.042 4.39e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1147 - - gmx:100819016 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0360 15 2421792 2426973 Lal23g1147 23 12939424 12948765 LSH