Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1146 ATGAGTGTTCCTAATACCACGCCGGCTATGATGTTCACGGCGGCTCAACCACTTTTCACGGTTGCTCAGTGGCAGGAACTGGAGCACCAAGCTCTTATCTTCAAGTATTTGAAAGCTGGTGTCACTGTTCCACCAGACCTCCTCGTACCCATTCAAAAGAGCTTACAATCGATGATGTCTCATCAAAATTACCCATCTTTGGGTTATTATGGGAATGGAAAGAAGATAGACCCAGAACCTGGAAGATGCAGAAGAACTGATGGGAAAAAATGGAGGTGTTCAAAGGATGCACATCCTGATTCTAAATACTGTGACCGCCACATGATACGACGTCGTTGCCGTTCAAGAAAGCTAGTGGAATCTCAATCACAATCTTCTTCTTCCTCTGTTGCTACCACTGGGACCACAACAACTACTGTTTCTGCTGCATCTGGAACCTTCCAGAACCTTCCCTTGCACACCAATGGTACCCGTCAAGGTTTCACTATTGGGGATGGGAACAACAACAACAGTACCATGAATATGATGGAGCCTTTGCCTCTTCCTACTGAGGATTCCAGGAAAGAGTTAAGGTTTGGACTGAGCTCGGAAGCAGATGAGCACAACTTCTTGCAGAAAGATCTGGGAACTATGAGACATCAAAGTTATTATGACTTCACATCAGATGACACATGGTCTCTCATGTCTCAGATTCCGCAAAACATCATTTCCGAATCAAGAAATCGTTCTACTATGGTCAACAACTGCTTCCAACAGCAGACAATGCGAGATACCGAGCTTTTAAATCTCTACGACAACGGAAGGTCGAAGGAACTTGTCTTTGATGGCCAATTAAGCTCACCAGGGTGTCTGAAACAGGAATATCAGTCCCCTCAGTCTCTCTTCAATGACTCTCACTTGAAGATGGATTTAAGCTCCTCTACCATTGACTATAGACCCATCATAGATTTTAATTGCAACCCAGATGAGAATTGA 975 0.4431 MSVPNTTPAMMFTAAQPLFTVAQWQELEHQALIFKYLKAGVTVPPDLLVPIQKSLQSMMSHQNYPSLGYYGNGKKIDPEPGRCRRTDGKKWRCSKDAHPDSKYCDRHMIRRRCRSRKLVESQSQSSSSSVATTGTTTTTVSAASGTFQNLPLHTNGTRQGFTIGDGNNNNSTMNMMEPLPLPTEDSRKELRFGLSSEADEHNFLQKDLGTMRHQSYYDFTSDDTWSLMSQIPQNIISESRNRSTMVNNCFQQQTMRDTELLNLYDNGRSKELVFDGQLSSPGCLKQEYQSPQSLFNDSHLKMDLSSSTIDYRPIIDFNCNPDEN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1146 324 PANTHER GROWTH-REGULATING FACTOR 13 323 - -
Lal23g1146 324 Pfam WRC 78 120 IPR014977 -
Lal23g1146 324 PANTHER - 13 323 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal23g1146 324 MobiDBLite consensus disorder prediction 119 137 - -
Lal23g1146 324 MobiDBLite consensus disorder prediction 115 137 - -
Lal23g1146 324 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal23g1146 324 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal23g1146 324 Pfam QLQ 19 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal23g1146 324 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1146 Lal-Chr23 12929787 12933431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1146 13 120 GRF Transcription Factor Family AT3G13960 56.140 5.78e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal23g1146 WRC 6.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1146 - - gmx:100809947 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0361 15 2428342 2431314 Lal23g1146 23 12929787 12933431 LSH