Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1145 ATGGCAACAAACGTAAACTGCGAAATGCCTCATAACAGAACCATTCTTACTCAACCTCCTCATTGGTATTCACCAAAAACTGGTATTTACAATAGCAAGTACGCTCCTTTGGATCTTCCCATTGACCCTTTTCTTGACGTTGTTTCTTATATTTTTTCCCATCACCATAATGGGGTTTCAGCCCTTGTTGATTCTTCATCTGGGTATTCCATTCCTTACCCAAAGTTGTTACCTTTAGTCAAATCCATTGCCTCTGGTCTCTACAAATTTGGTGTTAAACAAGGTGATATCGTTTTGCTTTTACTTCCAAATTCTATTTACTACCCCATTGTGTTACTTGGTGTTCTCTATCTTGGTGCTGTTGTTACACCATTGAATCCTCTCAGTACTGTCTCAGAAATAAATAAGCAAATCAATGACTGTGGTGTGAGTCTGGTGTTTACTGTAATTGAAAATGTGAAGAAACTAGAGTTATTAGGCCTTCCAATCATTACTGTTCCAGAAAATGAAAAGGGTTTGAATGATGATTGTTTCTCAAGTTTTTGTAACTTGATTTATGGTGGTGACTTTGATTTTCATAGTAGGCCTGTTATTAAACAGGAAGACACTGCTGCTATATTGTATTCTTCAGGGACTACAGGTGTGAGCAAAGGAGTTCTTCTAACTCATAAAAATCTTGTTTCTATGGTTGAACTTTTTGTGAGATTTGAAGCTTCTCAATATGAATACTCTTGCTTGAACAATGTGTTTCTAGCTGTTTTGCCAATGTTTCATGTATATGGTCTATCACTATTCGCGCTGGGATTGCTATCTTTGGGTTCTACAATCATCGTAATGAGGAAATTTGATATCGATGAGGTTATTGCAGCGATCGATAAATATAAAGTTACTCACTTTCATGTTGTTCCCCCAATATTGACCGCGTTGACAAAGAGGGCAAAAGGAATTCATGGTAGTAAGTTGCAGAGCTTGATACAGGTCTCCAGTGGTGCAGCATCTTTGAGTGAAAAATTTATTGAAGATTTTGTCCAAACTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAATCAACTGCAGTAGGAACACGCGGATTGAATACGGGAAAGTTTCACAGTTATTCTTCAATCGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAAGAGTGGTGCATTTTTGCCCCCAGGCAGCAGCGGCGAGCTTTGGTTGAGAGGGCCTTCAATTATGAGAGGATACTTAAATAACGAGGAAGCGACAATGTCAACAATTGATAAAGATGGTTGGCTACATACTGGAGATGTTGTTTATTTTGATCAGCATGGATATATGCATATATCTGACCGCTTGAAAGATATTATCAAATACAAGGGCTTTCAGATTGCCCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCGGAAGTAGCCGATGTTGCTATTACAGCCGCCGATGATGAAGAAAATGGGGAGATACCAGTGGCATTTGTGGTCAGGAAAGTTGGAAATGTGCTTACTGAAAAGCATCTTATGGATTATGTTGCTAAACAGGTTGCTCCATACAAGAAGGTTAGGAAAGTAGTCTTCACTGACAAGATACCGAGGTCGGCAACCGGGAAGATCCTTCGAAACCAGCTAAGAAATTGCCTGACTTCTAAACTCTGA 1680 0.3923 MATNVNCEMPHNRTILTQPPHWYSPKTGIYNSKYAPLDLPIDPFLDVVSYIFSHHHNGVSALVDSSSGYSIPYPKLLPLVKSIASGLYKFGVKQGDIVLLLLPNSIYYPIVLLGVLYLGAVVTPLNPLSTVSEINKQINDCGVSLVFTVIENVKKLELLGLPIITVPENEKGLNDDCFSSFCNLIYGGDFDFHSRPVIKQEDTAAILYSSGTTGVSKGVLLTHKNLVSMVELFVRFEASQYEYSCLNNVFLAVLPMFHVYGLSLFALGLLSLGSTIIVMRKFDIDEVIAAIDKYKVTHFHVVPPILTALTKRAKGIHGSKLQSLIQVSSGAASLSEKFIEDFVQTFPNVDFIQGYGMTESTAVGTRGLNTGKFHSYSSIGLLAPNMEAKVVDWKSGAFLPPGSSGELWLRGPSIMRGYLNNEEATMSTIDKDGWLHTGDVVYFDQHGYMHISDRLKDIIKYKGFQIAPADLEAVLILHPEVADVAITAADDEENGEIPVAFVVRKVGNVLTEKHLMDYVAKQVAPYKKVRKVVFTDKIPRSATGKILRNQLRNCLTSKL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1145 559 SUPERFAMILY Acetyl-CoA synthetase-like 47 556 - -
Lal23g1145 559 Gene3D - 29 456 IPR042099 -
Lal23g1145 559 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 16 558 - -
Lal23g1145 559 Pfam AMP-binding enzyme 58 461 IPR000873 -
Lal23g1145 559 Pfam AMP-binding enzyme C-terminal domain 471 545 IPR025110 -
Lal23g1145 559 Gene3D - 457 557 IPR045851 -
Lal23g1145 559 CDD 4CL 39 551 - -
Lal23g1145 559 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Lal23g1145 559 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 16 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1145 Lal-Chr23 12923887 12927947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1145 10 559 Monolignol Biosynthesis Gene Families AT4G19010 58.919 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1145 K01904 - gmx:100804808 880.167