Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1136 ATGGCTTACGAAGACGATCCGTATCGCGACGAGGATGGAGAAGCGTTGATGAATTATGACGATTTTCAATCGGATCGCGAGGCGTCTCCCCAGCCCAATCATCAAGGCCTAGTGGACGATTTCGAAGAAGAAGACGTTGACAATTTGGGCGGTCGCGATCGATCTCAGACTCCGGTATACGACAACAACGATTCGAGGGCGAAGCCGAGGAAGAGGCTCATCAAGAAGAGCGATACAGGGAAACAGCCGGTGGCGCCGGAGCTTTATGATGAAGTAGAGGAGGAGGAGGATAATGCTCCGCGGTTTGCAAGGGAGGGATCTGAAGAAGGGGATGCGAGGTATAAGAGAAAGAAGGGGAAGGAGGTTGGCAGTGGGAAGAAGGAGAAGAGGCATAAGGTGGAGAAGAGATTTGCAGGGAATACTAGCAGTGGTGGTGGGAAGAGTGCCTCGAAATTCGGGAGTTCGAGGAGAGGGCTTTCCGGGAATGGAGGGAGGGATCATGATGGTGAGGAAGTTAAGGAGATGTGGGATACGATTGCTGGTGGAGATTCTGAGGATGACCATGAGGGTCAGAGGAATCTGGATGATGACAACTTTATAGATGACACCGGAGTGGAACCTGCTTATTATGGTGATGAGGAACCACGTTCTCCTGGCGATGCTCCCCAGGCTGAGGAAGGGGAAGAGGATGATGAGATCAAGAATCTTTTCAAGATAGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCTGCTGAAATAGCTTTACTAGTTGAGAATGTCATGGCTGAGCTTGAGGTTACGGCTGAAGAAGATGCTGAACTTAATAGACAGGCGAAACCTGCGATTAATAAACTCAAGAAGTTGCCTCTTCTTACAGAAGTCCTCTCAAAGAAACAACTTCAACTAGAGTTCTTGGATCATGGAGTGCTGACTTTATTGAAGAATTGGCTTGAGCCTCTTCCTGATGGAAGCTTACCAAATATAAACATACGCACAGCAATTTTACAGATTTTGAATGATTTTCCTATTGACCTAGAGCAGTATGATAGAAGAGAACAGTTGAAGAAGAGTGGTCTTGGGAAGGTAATTATGTTTTTATCGAAGTCTGATGAGGAAATCAATCTAAATAGGAAATTAGCCAAGGAACTGGTTGATAAATGGAGCCGGCCTATATTCAATAAGAGCACACGGTTTGAAGACATGAGAAATGTTGAGGAGGAAAGAGTTCCTTACAGGAGGCCATCAGTTAAAAAGCCAACAAATAAAGCTGCAGGAATGGAATCTAGAGATGGTGATCTTGATTTGGATCTTTCACAGCCTAGGTCTGGACAGTCCTCCTCCAGGCAACTCACATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAATCTAAAATTGATCCAGAAGAAATTCGAGCACGAGCAAAAGCTGCTGCACAAGATCAGCACCGCATGAAGATGAATAAGAAGTTGCAGCAGTTGAAGGCGCCAAAAAAGAAGCAGCTTCAGGCCACAAAATTGAGTGTGGAAGGTCGTGGTATGGTAAAATATTTGTAA 1566 0.4572 MAYEDDPYRDEDGEALMNYDDFQSDREASPQPNHQGLVDDFEEEDVDNLGGRDRSQTPVYDNNDSRAKPRKRLIKKSDTGKQPVAPELYDEVEEEEDNAPRFAREGSEEGDARYKRKKGKEVGSGKKEKRHKVEKRFAGNTSSGGGKSASKFGSSRRGLSGNGGRDHDGEEVKEMWDTIAGGDSEDDHEGQRNLDDDNFIDDTGVEPAYYGDEEPRSPGDAPQAEEGEEDDEIKNLFKIGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQAKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILQILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINLNRKLAKELVDKWSRPIFNKSTRFEDMRNVEEERVPYRRPSVKKPTNKAAGMESRDGDLDLDLSQPRSGQSSSRQLTSRPEATPLDFVIRPQSKIDPEEIRARAKAAAQDQHRMKMNKKLQQLKAPKKKQLQATKLSVEGRGMVKYL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1136 521 MobiDBLite consensus disorder prediction 438 454 - -
Lal23g1136 521 MobiDBLite consensus disorder prediction 407 503 - -
Lal23g1136 521 MobiDBLite consensus disorder prediction 119 133 - -
Lal23g1136 521 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 250 397 IPR035441 -
Lal23g1136 521 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 306 394 IPR035441 -
Lal23g1136 521 ProSiteProfiles TFIIS N-terminal domain profile. 311 394 IPR017923 -
Lal23g1136 521 Coils Coil 257 277 - -
Lal23g1136 521 PANTHER PROTEIN IWS1 HOMOLOG 1 1 521 - -
Lal23g1136 521 MobiDBLite consensus disorder prediction 466 491 - -
Lal23g1136 521 MobiDBLite consensus disorder prediction 161 199 - -
Lal23g1136 521 Pfam TFIIS helical bundle-like domain 337 391 IPR017923 -
Lal23g1136 521 MobiDBLite consensus disorder prediction 1 231 - -
Lal23g1136 521 MobiDBLite consensus disorder prediction 141 157 - -
Lal23g1136 521 MobiDBLite consensus disorder prediction 97 118 - -
Lal23g1136 521 PANTHER PROTEIN IWS1 HOMOLOG 1 1 521 IPR044204 GO:0009742|GO:0032784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lal23g1136 Med26 6.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1136 K17498 - gmx:100801805 784.252