Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1134 ATGGGAACCGAAAACTCACTAGACAACACAGTATCCTTTCTTTTCTTTGTTTTCATCATCCTCGGCAGATCAGGTTTTGATTTAGCTCCTGCTCCAGCTTTGGAGGATCTCAACTCTCTCTCTGAACGATACTGTTGTAAATGTATGGCCAGCAGTGAGATGGAAAAATCCGCAAAAGATAAGGAGTCTAAGACGCCTCCTCCTACGTCACAGGAGCAGTCTTCGACAACCAGTGCTGGAACAAATAATCCTGACTGGTCCAGCTTTCAGGCATATTCTCCTATGCCTCCACATGGCTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACTCCACCACATCCCTATGTTGCAATGTATCCACATGGTGGGATATATGCTCATCCATCAATGCATCCGGGATCCTATCCTTTTAGTCCTTTTGCCATGCCTTCTAATGGTATTGTTGAGGCTTCAGGAAATACTCCTGGCAGCATGGAAGCGGATGTTGTTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAAAATAATGAACATAGTAAAACACCACGGACATCTGCTAATGGAATTCATTCGAAGAGTGGTGAGAGTGCAAGTGAAGGTACCAGTGAAGGAAGTGATGCTAATTCTCAGAATGATTCTGAATTGAAATCTGGGGGCAGGCAAGATTCATTTGAAGAAGAACCATCTCAAAATGGAACTTCAGCACATGCTTCTCAAAATGGGGGGCTTAATGCACCTCATACAGTGGTTAACCAAACTATATCTATGGTACCTATTTCTGCCGGTGGTGCTCCTGGAACAGTTCCTGGACCCACAACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCAACTTCAGCCAACATTCCTGCAATGCGTGGAAAGGTTCCAACTCCTGCAGTTGCTGGAGGGATGGTTACTACTGGATCACGGGATAGTGTTCAGTCTCAGCTTTGGCTGCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAGTCTAACAGGGAATCCGCTCGCAGATCCAGGTTGCGCAAACAGGCCGAGTGTGATGAACTTGCTCAGCGCGCCGAGGCTTTGAAAGAAGAAAACGCTTCTCTTCGGTCAGAAGTAAGTCGAATCAGGAGCGAATATGAGAAGCTACTCTCTGAGAATGCAGCACTCAAGGAGAGACTCGAGGAACACGGTAACGATGATCCCAGGTCTGGAAGGAACGATCAGCAAGTGGATAATGACAGTAAAAAAAGTGGGCAGACTCATTAG 1353 0.456 MGTENSLDNTVSFLFFVFIILGRSGFDLAPAPALEDLNSLSERYCCKCMASSEMEKSAKDKESKTPPPTSQEQSSTTSAGTNNPDWSSFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMHPGSYPFSPFAMPSNGIVEASGNTPGSMEADVVKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHSKTPRTSANGIHSKSGESASEGTSEGSDANSQNDSELKSGGRQDSFEEEPSQNGTSAHASQNGGLNAPHTVVNQTISMVPISAGGAPGTVPGPTTNLNIGMDYWGAPTSANIPAMRGKVPTPAVAGGMVTTGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEKLLSENAALKERLEEHGNDDPRSGRNDQQVDNDSKKSGQTH 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1134 450 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 49 449 - -
Lal23g1134 450 Pfam G-box binding protein MFMR 49 143 IPR012900 -
Lal23g1134 450 MobiDBLite consensus disorder prediction 355 377 - -
Lal23g1134 450 MobiDBLite consensus disorder prediction 168 275 - -
Lal23g1134 450 CDD bZIP_plant_GBF1 358 408 IPR045314 GO:0003700|GO:0006355
Lal23g1134 450 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 360 375 IPR004827 GO:0003700|GO:0006355
Lal23g1134 450 Pfam bZIP transcription factor 353 415 IPR004827 GO:0003700|GO:0006355
Lal23g1134 450 MobiDBLite consensus disorder prediction 67 88 - -
Lal23g1134 450 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 355 418 IPR004827 GO:0003700|GO:0006355
Lal23g1134 450 PANTHER G-BOX-BINDING FACTOR 3-RELATED 49 449 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal23g1134 450 MobiDBLite consensus disorder prediction 55 88 - -
Lal23g1134 450 SUPERFAMILY Leucine zipper domain 356 412 IPR046347 GO:0003700|GO:0006355
Lal23g1134 450 Gene3D - 356 411 - -
Lal23g1134 450 SMART brlzneu 353 417 IPR004827 GO:0003700|GO:0006355
Lal23g1134 450 MobiDBLite consensus disorder prediction 253 275 - -
Lal23g1134 450 MobiDBLite consensus disorder prediction 194 246 - -
Lal23g1134 450 Coils Coil 373 428 - -
Lal23g1134 450 MobiDBLite consensus disorder prediction 416 450 - -
Lal23g1134 450 Pfam Disordered region downstream of MFMR 183 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1134 Lal-Chr23 12854400 12863399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1134 49 422 bZIP Transcription Factor Family AT2G35530 67.016 1.07e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal23g1134 MFMR_assoc 4.8e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1134 K09060 - gmx:100101882 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1134 23 12854400 12863399 Lal23g1134 23 12854400 12863399 ECH
Lal16g0433 16 2626263 2634597 Lal23g1134 23 12854400 12863399 LSH
Lal15g0376 15 2530936 2538597 Lal23g1134 23 12854400 12863399 LSH