Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1128 ATGGAGTTATTCCCAGCACAACCAGACTTGTCCTTACAAATAAGCCCTCCCAACACCAAACCGACATCAAGTTGGAGGAGAAGTACTAATGCAACAGATGGAGAAGTGGATTTGGGGTTTTGGAAGAGAGCTTTGGATTCTAGAAACTCCTTATCATCATCAATGCCTAAAACTAATGCCATATCTTATGGCCTGATTTCCCTCACCAATCCAACAAGGGCTTCTTCAAACACCAATAATGAAAACATTAACAACAACAACAATAACCCCTTCCAACCATTTCATCAAAATCACTACTTTCACCAGCATCCACTACTCTTCCAGCCACAAAGCCAAGAACTTGGTTTTCTGCGACCCATAAGAGGAATCCCAGTGTACCAAAACCCACCTCCTACTATGACATTTCCTCAACTTCAACATCAACAATATCATAATCTTCTAGATACTTCTTCCACAACCATTTCACCTATTTCCAACACAGCTACTACAACATCCCCTTTTCATCATTCTCAAGTTTTGATGCGGTCGAGGTTATTGTCACGGTTCCCTGTGAAGCGAAGCATGAGGGCTCCTCGGATGCGTTGGACTACTACACTCCATGCTCGCTTTGTTCACGCTGTTGAACTCTTAGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACTTTAGCACATGTCAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACGGACAGAACAGCAGCTTCATCAGGGCAATCTGATGTATACGATAATGGATCATCTGAAGATAATTCTGATGACTTAATGTTTGACATTAATTCTTCAAGAAGGTCTGATGTATCCATTAAACAAGATAAAGAATTTCATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTACATGGCAAACCGAAGGCTGATTCTGTTAGAAATGTGGCTTCTCATGAGAAGGATATGGATCCAAATTGCCTAAGCTGTGAGAGAATATCAGATGGAAGCTCATCTTCGAACCTTTCAGGATCAAGCACCAAAAAGCTTAACTTGGATTTAGAATTCACCTTGGGCCAGCCACTTTGA 1095 0.4228 MELFPAQPDLSLQISPPNTKPTSSWRRSTNATDGEVDLGFWKRALDSRNSLSSSMPKTNAISYGLISLTNPTRASSNTNNENINNNNNNPFQPFHQNHYFHQHPLLFQPQSQELGFLRPIRGIPVYQNPPPTMTFPQLQHQQYHNLLDTSSTTISPISNTATTTSPFHHSQVLMRSRLLSRFPVKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRTAASSGQSDVYDNGSSEDNSDDLMFDINSSRRSDVSIKQDKEFHGLWSNSSREAWLHGKPKADSVRNVASHEKDMDPNCLSCERISDGSSSSNLSGSSTKKLNLDLEFTLGQPL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1128 364 MobiDBLite consensus disorder prediction 1 30 - -
Lal23g1128 364 MobiDBLite consensus disorder prediction 11 30 - -
Lal23g1128 364 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 363 - -
Lal23g1128 364 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 363 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal23g1128 364 SUPERFAMILY Homeodomain-like 188 244 IPR009057 -
Lal23g1128 364 Pfam Myb-like DNA-binding domain 192 243 IPR001005 -
Lal23g1128 364 Gene3D - 190 247 - -
Lal23g1128 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1128 Lal-Chr23 12806920 12811704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1128 1 363 G2-like Transcription Factor Family AT4G17695 39.153 2.40e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal23g1128 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1128 - - aprc:113868756 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1128 23 12806920 12811704 Lal23g1128 23 12806920 12811704 ECH