Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1121 ATGGGTGCTGGAGGCCCTGATGAAGATGATAATAGGTGGCCACCATGGTTGAAGCCACTACTCAAACAAACTTTCTTTGTTCAATGCAAGCAACATGCTGATTCCCACAAGAGTGAATGTAACATGTATTGTTTGGATTGTATGAATGGGTCTCTCTGTTCTCTCTGCCTTATCCATCACAAGGACCATCGTGTTATTCAGATTAGGAGGTCCTCTTACCATGATGTGATTAGGGTTAATGAGATTCAGAAAGTGTTGGACATAACTGGAGTCCAAACCTACATTATCAACAGTGCAAGGGTTGTCTTTTTGAATGAAAGGCCTCAACCAAGGCCTGGAAAAGGTGTCACAAACACATGTGAAGTGTGTGAGCGTAGCCTTCTTGATTCTTACAGGTTCTGTTCGCTTGGTTGCAAGAGAGTTGGAACATCGAATAATTTCCAGAAGAAGCACTCAGCTCCAATGGCATCAGATTCGGACGATTCATATTGTAGCAGCAGCCATGCCCGAAACTTGAACTCTATGGTGCAGAAATTCACATCATCTACACCATCACCAACTTCAGTCAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAATCATAGAGTATTAG 642 0.4346 MGAGGPDEDDNRWPPWLKPLLKQTFFVQCKQHADSHKSECNMYCLDCMNGSLCSLCLIHHKDHRVIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKRVGTSNNFQKKHSAPMASDSDDSYCSSSHARNLNSMVQKFTSSTPSPTSVNYRTAKRRKGIPHRAPMGGLIIEY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1121 213 Pfam PLATZ transcription factor 69 139 IPR006734 -
Lal23g1121 213 PANTHER - 5 209 - -
Lal23g1121 213 MobiDBLite consensus disorder prediction 178 192 - -
Lal23g1121 213 MobiDBLite consensus disorder prediction 178 202 - -
Lal23g1121 213 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1121 Lal-Chr23 12768713 12771232 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal23g1121 PLATZ 1.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1121 - - ahf:112747407 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1121 23 12768713 12771232 Lal23g1121 23 12768713 12771232 ECH
Lal16g0463 16 2868183 2870597 Lal23g1121 23 12768713 12771232 LSH
Lal15g0407 15 2756520 2758985 Lal23g1121 23 12768713 12771232 LSH