Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1107 ATGGGAGATGTGGCTAAGGACCTTACAGCAGGGACTGTTGGAGGGGCAGCACAATTGGTAACTGGACACCCCTTTGACACCATAAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCTGGCCAGCTTCCTAAGTATTCAGGTGCAATTGATGCAGTCAAGCAGACAATAGCGGCCGAAGGCCCGAGGGGTTTATACAAAGGTATGGGAGCTCCACTTGCTACGGTGGCCGCTTTAAATGCTGTCCTTTTCTCAGTAAGGGGACAAATGGAGGCATTGTTGAGATCCCATCCTGGTGCCACTCTCACTATAAGTCAACAAATTGTTGCTGGAGCTGGAGCTGGAGTTGCTGTTTCCATTCTAGCTTGCCCTACTGAATTGATCAAATGCAGGTTGCAAGCACAAAGTGCTGTCGCTGGTTCTGGAACAGCTGCAGTAACATTGAAATATGGAGGACCAATGGATGTGGCCAAACAAGTTCTAAAGTCAGAAGGGGGCATAAAAGGCCTTTTCAAGGGCTTAGTTCCCACAATGGCACGTGAAATACCAGGAAATGCTGCTATGTTTGGTGTATATGAAGCATTAAAGCAATATCTTGCAGGAGGGTCTGATACCTCTGGACTAGGCAGAGGTTCTCTTATTGTTGCTGGAGGCTTGGCTGGAGCTTCCTTTTGGGTCATGGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAGTCCAAAGTTTTCTGGTTCAGTTGATGCATTCAGAAAGATAAGATCTATTGAAGGGTTTAAAGGCCTTTACAAGGGTTTTGGTCCTGCAATGGCCAGAAGTATTCCTGCAAATTCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGTCATGA 894 0.4631 MGDVAKDLTAGTVGGAAQLVTGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKQTIAAEGPRGLYKGMGAPLATVAALNAVLFSVRGQMEALLRSHPGATLTISQQIVAGAGAGVAVSILACPTELIKCRLQAQSAVAGSGTAAVTLKYGGPMDVAKQVLKSEGGIKGLFKGLVPTMAREIPGNAAMFGVYEALKQYLAGGSDTSGLGRGSLIVAGGLAGASFWVMVYPTDVVKSVIQVDDYKSPKFSGSVDAFRKIRSIEGFKGLYKGFGPAMARSIPANSACFLAYEMTRSALS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1107 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lal23g1107 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lal23g1107 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 296 - -
Lal23g1107 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Lal23g1107 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 296 - -
Lal23g1107 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lal23g1107 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Lal23g1107 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Lal23g1107 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Lal23g1107 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1107 Lal-Chr23 12685075 12687430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1107 21 296 Antiporters AT1G79900 34.409 1.97e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1107 K15109 - gmx:100781634 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1107 23 12685075 12687430 Lal23g1107 23 12685075 12687430 ECH
Lal16g0475 16 2939561 2946826 Lal23g1107 23 12685075 12687430 LSH