Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1100 ATGGAACATCAGCATAGTTGGATATTAAGACTGGTGTCATATATTATTTGCCTATACATATTCATCAGATCAGCTTCTGCAACTGAAGGGTTTGAGAGCATAGCATGCTGTGCTGATTCAAATTATGCAGACCCATTGACCACCTTAAATTACACAATAGATTATAGCTGGTTCTCTGATAAAGGAAGTTGCAGTCAAATAAGCAAGAACGTTACGAACTATGGAAGCAATGAAAATGTTAGATTGTTTGATATAGATGAGGGAAAGAGATGCTACAATTTGCCAACAACTAAGAATGGAGTATATCTGATAAGGGGCATATTTCCGTTTGGTGAATTATCAAATTCTTCTTTTTATGTTACAATCGGGGTAACACAATTAGGTTCAGTGATATCATCCAGGCTCCAGGACCTGGGAATTGAGGGAGTTTTCAGAGCCACCAAAAACTACATCGACTTCTGCTTAGTGAAGGAGAAAGTAAATCCCTATATTTCTCAGCTTGAATTAAGGCCATTGCCTGAAGAGTACATACATGGTTTGCCTACTAGTGTTTTAAAACTGATAAGCAGAAACAATCTTAAGGGCGAGGGAGATGACATCAGGTATCCAGTTGACAAAAGTGATAGAATCTGGAAAGGAACTTCAAATCCATCATATGCTCTTCTGTTATCTTCCAATGCCACCAACTTTGACCCCAAAACTAATATGACACCTCCTCTTCAAGTCCTACAAACAGCTCTTACTCACCCCGAGAAGTTGGAATTCATCCACAACGACCTTGAGAATGAGGGCTATGAATACCGTGTGTTTCTATACTTCCTTGAATTAAATAGCTCACTAAAAGCTGGCCAAAGGGTGTTTGACATTCATGTTAACAGTGAGGCTAAAGTGGAGAGGTTTGATATATTGGCTGAAGGGTCAAACTATAGATACACTGTCTTGAACTTTTCAGCAACTGGATTACTTAATCTAACCTTGGTCAAGGCATCTGGTTCTGAGAATGGTCCCCTTATGAATGCTTATGAAATTCTACAGGTTCGACCATGGATTGAAGAGACCAACCAAACAGAGGTGGAAGTGATCCAGAAGCTGAGAAAAGAACTGTTGTTACAAAACCAAGACAATAAAGTGATAGAGAGTTGGTCTGGAGACCCTTGTATTATTTTCCCCTGGCAGGGAATAGCATGTGATAATTCATCTGTTATCACTGAGCTGGATCTTTCCTCTAGTAATCTCAAAGGAACAATTCCTTCCAGTGTCACTGAGATGATCAACTTAAAAATACTGAACCTGAGCCACAGCAGCTTCAATGGCTATATCCCATCGTTTTCTATGTCCTCCTTGCTGATATCAATAGATCTGAGCTACAATGATCTTATGGGGTCACTTCCAGAATCAATTCCTTCACTGCCACATTTAAAATCATTATATTATGGCTGCAATCAACACATGAGTGAAAAGGTTCCAGCAAATTTGAACAGTTCGTTAATCAAGACAGATTGCGGAGAATGCCAGGCAGATAATCCTAAATTTGGACAAATAATCGTTATTGGTGCTGTTACATGTGGATCAATCTTGATTACTTTGGCTGTTGGACTTATTTTGGTTTGCTGCTATAGACTTAAATTAACTCCATCAGAAGGATTTGGAGAAAAGAACTATCCAATGGCAACAAACATAATTTTCTCTTTCCCAGCAAGCAAGGATGATTTCTTCATAAAGTCCTTGGTCGTGACAATTCAAATATTCACTTTGGAATACATAGAGGTGGTCACAGAGAGGTACAAGACTTTAATAGGAGAAGGAGGGTTTGGCTCTGTTTACCGTGGCACTCTAGAAGATGGTCAAGAAGTGGCAGTGAAAGTTCGGTCAGCCACATCAACTCAGGGAACTAAAGAATTTGATAACGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTAGTGCCTCTTCTTGGTTACTGCAATGAAAAGGATCAGCAAATTCTCGTTTATCCTTTCATGTCCAACGGTTCTTTGCAAGATAGATTATATGGGGAACCAGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTGTTTCTCTCGGTTTGGCATATCTTCACACATTTCCAGGACGTTCTGTAATACACAGAGATGTAAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAAGTTGCAGACTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACTGCGGGATATCTGGATCCTGAGTACTACTCAACCCAGCAATTATCTGAAAAGAGTGATGTCTACAGCTTTGGTGTGGCTCTACTTGAAATTGTGAGTGGCAGGGAACCTCTCAACATAAAGAGACCGAGGAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGAGCATCAAAAATTGACGAAATTGTGGACCCTGGCATTAAGGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTATTGAACCCATGTCAGCATATAGGCCATGCATGGTTGACATTGTACGTGAGTTGGAAGATGCTCTCATTATAGAAAACAATGCATCTGAATACATGAAGTCCATAGACAGCCTTGGGGGATCGAACCACTACTCTATTGTCATGGAGAAAAGGGTGCTTCCATCAACTTCATCATCTACAGCAGAGTCAACCATCACCACTCAAACCTTGTCCCAACCACAGCCCAGATAG 2760 0.4029 MEHQHSWILRLVSYIICLYIFIRSASATEGFESIACCADSNYADPLTTLNYTIDYSWFSDKGSCSQISKNVTNYGSNENVRLFDIDEGKRCYNLPTTKNGVYLIRGIFPFGELSNSSFYVTIGVTQLGSVISSRLQDLGIEGVFRATKNYIDFCLVKEKVNPYISQLELRPLPEEYIHGLPTSVLKLISRNNLKGEGDDIRYPVDKSDRIWKGTSNPSYALLLSSNATNFDPKTNMTPPLQVLQTALTHPEKLEFIHNDLENEGYEYRVFLYFLELNSSLKAGQRVFDIHVNSEAKVERFDILAEGSNYRYTVLNFSATGLLNLTLVKASGSENGPLMNAYEILQVRPWIEETNQTEVEVIQKLRKELLLQNQDNKVIESWSGDPCIIFPWQGIACDNSSVITELDLSSSNLKGTIPSSVTEMINLKILNLSHSSFNGYIPSFSMSSLLISIDLSYNDLMGSLPESIPSLPHLKSLYYGCNQHMSEKVPANLNSSLIKTDCGECQADNPKFGQIIVIGAVTCGSILITLAVGLILVCCYRLKLTPSEGFGEKNYPMATNIIFSFPASKDDFFIKSLVVTIQIFTLEYIEVVTERYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTKEFDNELNLLSAIQHENLVPLLGYCNEKDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSVSLGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYSTQQLSEKSDVYSFGVALLEIVSGREPLNIKRPRNEWSLVEWAKPYIRASKIDEIVDPGIKGGYHAEAMWRVVEVALQCIEPMSAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNHYSIVMEKRVLPSTSSSTAESTITTQTLSQPQPR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1100 919 PANTHER OS05G0525400 PROTEIN 61 879 - -
Lal23g1100 919 Pfam Malectin-like domain 38 346 IPR024788 -
Lal23g1100 919 MobiDBLite consensus disorder prediction 898 919 - -
Lal23g1100 919 Gene3D Phosphorylase Kinase; domain 1 599 669 - -
Lal23g1100 919 Gene3D Transferase(Phosphotransferase) domain 1 670 878 - -
Lal23g1100 919 Gene3D Ribonuclease Inhibitor 356 510 IPR032675 -
Lal23g1100 919 CDD STKc_IRAK 599 862 - -
Lal23g1100 919 SUPERFAMILY Protein kinase-like (PK-like) 573 861 IPR011009 -
Lal23g1100 919 SUPERFAMILY L domain-like 378 492 - -
Lal23g1100 919 Pfam Protein tyrosine and serine/threonine kinase 597 861 IPR001245 GO:0004672|GO:0006468
Lal23g1100 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Lal23g1100 919 Gene3D - 195 347 - -
Lal23g1100 919 SMART serkin_6 593 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1100 919 PANTHER OS07G0107800 PROTEIN-RELATED 61 879 - -
Lal23g1100 919 ProSiteProfiles Protein kinase domain profile. 593 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1100 919 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1100 Lal-Chr23 12632800 12642054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1100 15 868 Receptor kinase-like Gene Family AT1G67720 34.109 2.09e-133 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lal23g1100 Malectin_like 7e-47 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1100 - - gmx:100781986 1412.51