Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1088 ATGGATCCAACCCACTCCATCGATTTTCAGCAATACCCACAAGCCCTAATCTCAGAGCACAAAGATTCGGTAATGGAAGATTCCGATGAATCCTTGCTCGATTCAATGGTTTGTGATTCCAGTTCACGATTGATCCCAACTGGGTTTACAAGACCTGACAAAGCAGATGGGGAGTATTTCATGTTTGTGAATGCGGGTGGTGAAGCTTTTAATGATGCAGATGGCAGATTAACTTTCCTGAGTGACACCTTTTTTGATGGTGGGAATGTTTTTCGTACTGATGAGCAGATAGTGGGTGCTGGAGATTACCCGTTTATATATCAATCAGCTCGACTAGGAACTTTTTGCTATAGGTTTGACAATATTCCTCCAGGAAACTATGTTATCGATCTTCATTTTGTGGAGATCATTAACACAAATGGGCCAAAAGGAATGAGGGTATTCAATGTATATATCCAAGAAGAAAAGGTTCTGTCTGAATTAGATATATTTGCGGTTGTTGGAGCCAATAAGCCACTACAGTTGATTGATCCAAGGGTGCGTGTGAAGGATGATGAAGTAATCCTCATAAGATTTGAAAGTATAAATGGAAGCCCATTAGTCAGTGGGATTGGCATTAGGAAAGCAACAAAGGTTTCAGTTCCACAAGTGACGAGTGACTACATTAAATGTAACTACTGTGCTATGGAGTTTGAAATTCCTTCACCACAGAAGAAAGTTATGTGGACGAAATCTACTGCAAAATACGAGAATAAGATTAAAGAGCTTACTATGCAATGTGAGGTCAAGGCAAAAGAATGCTATGAGGCATGGATATCATTAACTGCAACCAATGAGCAATTGGAAGCAACCCAAATGGAACTAGACAAAGTGACATTTAAGTCACTCAGTATTGATCAAACTTTGGAGAAACAAGCTGAAAACCTGAGGAGTATTTCTAGCAGGTATGAGCTTGATAAGAAGAAATGGGCAGAAGAAATTATCAGTTTACAGGAAAAAGTAAAGTTGATGAAGAGTGACTATTGTCAACTTTCCTTTGAAGCACATGAATGTGTTGATTCAATCCCTGAATTAAATAAGATGGTCTTTGCTGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAACGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGCCGCTGTCGTCCATTGAATAAGGTTGAAATCTCAGCTGGGTCTTCAACAGTGGTGGATTTTGATGCAGCAAAGGATGGATGCCTAGGAATTTTGACAAGTGGCTCCACTAAAAAGTCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCCTCATCAATGGCAATCTCTGTGTTAGATGGCTACAATGTTTGCATCTTTGCCTATGGACAAACAGGAACAGGAAAAACATTTACCATGGAGGGAACAGAAAAGAATAGAGGAGTAAATTACAGGACTCTTGAGCTCTTGTTTAAAATTTGCAAGGAAAGAAGTGAAACATTTGCATATGACATATCTGTTAGTGTGTTTGAGGTTTATAATGAACAAATCAGAGATCTGTTGGCTACAGGACCAACACCAAAAAGGTTGGAGATAAAACAAGCATCTGAAGGATCTCACCATGTTCCTGGTGTTGTAGAAGCCAAGGTTGATAACATTAGTGAAGTGTGGAATGTACTGCAGGCTGGAAGTAATGCTAGAGCAGTTGGGAGTAATAACATCAATGAGCATAGCAGTCGATCTCACTGCATGCTTTGTATAATGGTAAGGGCTAAAAATTTGATGAGTGGCGAGTGTACCAAGAGCAAGCTCTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAGGACTGATGTGCAAGGAGAGCGGCTTAAGGAAGCACAAAATATCAACAGATCTCTTTCAGCTCTTGGGGATGTGATATCAGCTTTAGCAGCCAAAAGTAGTCACATTCCGTATAGGAACTCAAAATTGACACACTTACTTCAAGACTCATTAGGAGGTGACTCCAAAACATTGATGTTTGTTCAAATCAGCCCGTCAGACCAGGACGTAAGTGAGACTATAAGCTCACTTAATTTTGCCACAAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGACACGGGCGAACTTCAAAAGATGAAAACAATGCTTGAAAAGGCGCGGAGTGAGTGCAGAATTAAAGATGAGTCTATACGGAAAGTAGAAGAAAACTTGCAAAGCATGGAGGGTAAGGCCAAAGGCAAGGATAATATTCTTAAAAGTTTACATGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGTTGAAGACATCCATGCAGAATCAGATAGAGAAACAAATTTCCCTATTATCAGACAAATTGAAAGGAAAAGAAGAAATATGCAGTACTCTCCAACAAAAGGTTGCTCTCTCTTTGAAATGCTACTTGATTTGTGGCTCATCTGTTATTTATTCGTCGTTAGTAACACAAGTGAAAGAGCTGGAGAAACGTCTGAAAGAACAACTGCAGTCAGAGACGGCAAGTTGTCAACAGAAGGTGTTGGAGCTGGAAAAGAAGCTGAAAGATCAATTGAAAGGGTCAGAGTCTCAGTCTGCCATTCTAAAAGAAAAGGTGAAGGAGCTTGAGAGAAAATTGAAGGACCAGGATCAGAATTCTGAGTTGTCCTTCTATCGGCAACAGGTGACGGAGCTTGAGAGAAAACTGAAGGAGCAGGGTCAGAGTTCAGAGCTGTCCTTCTATCGTGAACAGGTCAAGGAGCTTGAGAAAAAATTGAAGGAGCAGCAACAGACCTCAGAGTTGGCCTTGCTTCGTCAACAAGTGAAGGAACTAGAGGACAGGAACAGAGAACAAGAGCAACAGTGGCAACAACAAGCTCATTGTTTTGTTGAAGCAGCAAAGGCCACACCTGACATAGGCAAAGGATGCAAAACAAGTGAGGAATGCCCAAATGAGATTGACCCTCATATTTTAAGGAGTTCAAACTCATCAAACCACCAGATAAATCAAGGTTCTACTTTGTTCAAAGGGAATGATTCTACTCATCATTTGAGAAGTAAACGGGGTTTCAGAAGCAATGAAATAGAAAACAGTTATGTCATGTCATCATCTTTATACAAAAGGAAAGTCACAAGGAAATCTGATCCACCTATGATAGGAAAGGGTGTGAGGCCAATAACAAAGCCAGTTATTACTACTCAACCTCCATTGTCTCACAAGAGAGCTAGCACTAGCAGAGATGTTCAAGGAATTAAAGAGAGGGACAGTAAGAAGAAAGTTTGGAATAGATAG 3363 0.4029 MDPTHSIDFQQYPQALISEHKDSVMEDSDESLLDSMVCDSSSRLIPTGFTRPDKADGEYFMFVNAGGEAFNDADGRLTFLSDTFFDGGNVFRTDEQIVGAGDYPFIYQSARLGTFCYRFDNIPPGNYVIDLHFVEIINTNGPKGMRVFNVYIQEEKVLSELDIFAVVGANKPLQLIDPRVRVKDDEVILIRFESINGSPLVSGIGIRKATKVSVPQVTSDYIKCNYCAMEFEIPSPQKKVMWTKSTAKYENKIKELTMQCEVKAKECYEAWISLTATNEQLEATQMELDKVTFKSLSIDQTLEKQAENLRSISSRYELDKKKWAEEIISLQEKVKLMKSDYCQLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYNEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEISAGSSTVVDFDAAKDGCLGILTSGSTKKSFRFDRVYTPKDDQVDVFADASSMAISVLDGYNVCIFAYGQTGTGKTFTMEGTEKNRGVNYRTLELLFKICKERSETFAYDISVSVFEVYNEQIRDLLATGPTPKRLEIKQASEGSHHVPGVVEAKVDNISEVWNVLQAGSNARAVGSNNINEHSSRSHCMLCIMVRAKNLMSGECTKSKLWLVDLAGSERLARTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVSETISSLNFATRVRGVELGPVKKQIDTGELQKMKTMLEKARSECRIKDESIRKVEENLQSMEGKAKGKDNILKSLHEKIKELEGQIELKTSMQNQIEKQISLLSDKLKGKEEICSTLQQKVALSLKCYLICGSSVIYSSLVTQVKELEKRLKEQLQSETASCQQKVLELEKKLKDQLKGSESQSAILKEKVKELERKLKDQDQNSELSFYRQQVTELERKLKEQGQSSELSFYREQVKELEKKLKEQQQTSELALLRQQVKELEDRNREQEQQWQQQAHCFVEAAKATPDIGKGCKTSEECPNEIDPHILRSSNSSNHQINQGSTLFKGNDSTHHLRSKRGFRSNEIENSYVMSSSLYKRKVTRKSDPPMIGKGVRPITKPVITTQPPLSHKRASTSRDVQGIKERDSKKKVWNR 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1088 1120 Coils Coil 365 399 - -
Lal23g1088 1120 Coils Coil 912 978 - -
Lal23g1088 1120 Coils Coil 842 909 - -
Lal23g1088 1120 SMART kinesin_4 397 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 827 - -
Lal23g1088 1120 PANTHER KINESIN-LIKE PROTEIN KLP-3 850 1106 - -
Lal23g1088 1120 Coils Coil 770 804 - -
Lal23g1088 1120 Pfam Malectin domain 61 204 IPR021720 -
Lal23g1088 1120 ProSiteProfiles Kinesin motor domain profile. 399 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 ProSitePatterns Kinesin motor domain signature. 621 632 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal23g1088 1120 Gene3D Kinesin motor domain 345 723 IPR036961 -
Lal23g1088 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 757 IPR027417 -
Lal23g1088 1120 CDD KISc_C_terminal 397 723 - -
Lal23g1088 1120 MobiDBLite consensus disorder prediction 1102 1120 - -
Lal23g1088 1120 Gene3D - 56 211 - -
Lal23g1088 1120 Coils Coil 742 762 - -
Lal23g1088 1120 MobiDBLite consensus disorder prediction 1066 1120 - -
Lal23g1088 1120 Pfam Kinesin motor domain 405 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal23g1088 1120 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 827 - -
Lal23g1088 1120 PANTHER KINESIN-LIKE PROTEIN KIN-14R 850 1106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1088 Lal-Chr23 12534911 12541504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1088 371 774 Calmodulin-binding Proteins AT5G65930 40.342 2.68e-83 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0429 15 2933819 2940509 Lal23g1088 23 12534911 12541504 LSH