Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1078 ATGGACACACCCAAAGGACCCGGATCCGAAAACCTAATTGTTGCATGCACCACCATGCTCTCCTACCGCCGCTTCTCCACCTGCCGCGAATTCGCCACCCGCATCCCAAGACTCGACCTCATTACCTCCGTCTCCCTCGACAAAATCATCGCCATCGCCGACATCCTCTCCTCCGTCGACCGCCGCCTCCCCAACAATCTCCCCGATCACTACTCCATCCTCCAGCTCCGCCGCGACGACGCAGCCCGCGACCGCGACCTCCTCACGCGCCAGTTCAAGAAGCTCGCTCTCCTTCTTGACCCCACCGCCGCCAACAAATTCCCCTTCTCTGACGAAGCCCTCACGTGCGTACGTGAGTCTTGGCACGTGCTCTCTGACCCCAAAAGCCGCGACCTTTACCACACCCAGATTGGTTATCGGCCACCCAGTGCAACATTCTGGACCGCGTGCCCTTACTGTTGGAACCTTTTTGAGTATGAGGGTAAGTACGAGGATTGCCCCTTGCTGTGTCAGAGTTGTGGAAAAGCGTTTCACGGCGTTCCGGTAACGGCTCCGGTGAAGGATGATGATCAGAAGAAGGAGTACTATTGGTGCCAAGCAAGTGTACCCTTGAGGTATATAGATAAGGAAGACAGCAACTACATGTATATGGGTGTGAAAGCTACCCATTTTGATGAAACCAATTTTGTGTACATTTCTGACGATGATGGTGATGATGTTGTTGGAGGTAGTGAAGGGTTTGGGAAGAATGTGGGAAAAGAGGTTTGGGGTGATGTGAGGAATCAAGGGTTTCAGTTTCAGGGGAATGCTCCAAATTCACAAGTTGAATTGGAAGGGACTAGTGGGAAGAGGAAGATGAGGATGAAGACTGTGGCAAGGAGGGGTGCTGATAACATGGCGAGGAACAGGCACAGAGGTTTTCGTGCCGATAATGACTTGGATTTGGATGAAGGTGAAGGTGACTTGGAGTTCACAGAAGGAGATGGAGATGTCTTCATTGGTGTAAGGGGGTATGCTGTGGTGGAGTTTGGACCCCCTAAATCTCATTTGCCCCTTTTCATGGAACCTCCCTAA 1074 0.5223 MDTPKGPGSENLIVACTTMLSYRRFSTCREFATRIPRLDLITSVSLDKIIAIADILSSVDRRLPNNLPDHYSILQLRRDDAARDRDLLTRQFKKLALLLDPTAANKFPFSDEALTCVRESWHVLSDPKSRDLYHTQIGYRPPSATFWTACPYCWNLFEYEGKYEDCPLLCQSCGKAFHGVPVTAPVKDDDQKKEYYWCQASVPLRYIDKEDSNYMYMGVKATHFDETNFVYISDDDGDDVVGGSEGFGKNVGKEVWGDVRNQGFQFQGNAPNSQVELEGTSGKRKMRMKTVARRGADNMARNRHRGFRADNDLDLDEGEGDLEFTEGDGDVFIGVRGYAVVEFGPPKSHLPLFMEPP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1078 357 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 336 - -
Lal23g1078 357 SUPERFAMILY Chaperone J-domain 62 136 IPR036869 -
Lal23g1078 357 SMART dnaj_3 68 129 IPR001623 -
Lal23g1078 357 Gene3D DnaJ domain 68 138 IPR036869 -
Lal23g1078 357 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 336 - -
Lal23g1078 357 Pfam DnaJ domain 69 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1078 Lal-Chr23 12450266 12452761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1078 9 206 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 33.884 3.25e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1078 - - lang:109350398 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1078 23 12450266 12452761 Lal23g0061 23 509040 511759 PCT
Lal23g0061 23 509040 511759 Lal23g1078 23 12450266 12452761 PCT