Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1069 ATGACGACACGGTTCAAGAAGAACAGAAAGAAGCGTGGCCACGTCAGCGCCGGTCACGGTCGTATCGGGAAGCACCGTAAGCATCCCAGCGGTCGCGGTAACGCCGGAGGAATGCACCACCACCGGATCCTGTTCGACAAGTACCATCCCGGTTACTTCGGTAAAGTAGGTATGCGCTACTTCCACAAGCTTCGCAACAAGTTCTATGCCCCTATCGTCAACATCGATAAGATCTGGTCTCTTGTTCCCAAAGAGGTTAAGGATAAAGCCACAAATGATAAGGTTCCGTTGATTGATGTCACACAGTTTGGTTACTTTAAGGTTTTGGGGAAAGGTGTGTTGCCTGAGAACCAACCTATTGTTGTGAAAGCGAAACTCGTGTCGAAGATCGCGGAGAAGAAGATTAAGGAAGCTGGTGGTGCTTTGCAATATTCTCTAATAATACTATAA 450 0.4778 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPSGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYAPIVNIDKIWSLVPKEVKDKATNDKVPLIDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGALQYSLIIL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1069 149 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 142 - -
Lal23g1069 149 MobiDBLite consensus disorder prediction 1 35 - -
Lal23g1069 149 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 29 142 IPR021131 -
Lal23g1069 149 Gene3D - 58 145 - -
Lal23g1069 149 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 1 142 - -
Lal23g1069 149 Hamap 50S ribosomal protein L15 [rplO]. 1 145 IPR030878 GO:0003735|GO:0006412|GO:0015934
Lal23g1069 149 ProSitePatterns Ribosomal protein L15 signature. 107 139 IPR001196 GO:0003735|GO:0005840|GO:0006412
Lal23g1069 149 MobiDBLite consensus disorder prediction 1 38 - -
Lal23g1069 149 SUPERFAMILY Ribosomal proteins L15p and L18e 6 143 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1069 Lal-Chr23 12400675 12401652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1069 1 142 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 86.620 1.04e-89 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1069 K02900 - csv:101221117 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0518 16 3294699 3298362 Lal23g1069 23 12400675 12401652 LSH
Lal15g0463 15 3150384 3150824 Lal23g1069 23 12400675 12401652 LSH