Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1059 ATGAAGAAAGTAATCACTCTCATCTCTTCTCAGTGGCTTGTTTTCCTTCTCATCAAGTCACTATTACTATCACAAACTGCAATGGCAGAACCAAGGACGAAGACAGTCCTAATAACATGTGGACATGAACTAGAGCACAACACAACTATCTTTGTTCCAAACTTTGTTGCAACAATGGACAAAATCAGTGAACAGATGCGCACTACTGGCATGGGAAAAGCTGTTACAGGGACAGGACCTGATACTAACTATGGCCTGGCTCAATGCTATGGAGATCTTTCTTTACTTGACTGTGTATTATGCTATGCAGAGGCCCGCACGGTTCTTCCCCAGTGTTTCCCTTATAATGCTGGTCGACTTTACCTTGATGGTTGTTTCATGAGGTCTGAGAACTATAGTTTTTTTAATGAGTATACAGGACCAGGAGATAGAGCTGTATGTGATAAAACAGCTAAGAAGGACTCAAGTTTTCAAGCAGCAGCAAAGCAAGCAGTTTTAAGTGCAGTCCAAGATGCACCCAACAATAACGGCTACGCTAGGGGGAAGGTTGCTGTATCAGGAACAGCAAACGAATCTGCTTATGTTCTGGCCGATTGTTGGAAGACTTTGGACACAAGATCTTGCAAAGCTTGTCTTCAGAATGCATCTTCTTCGATGTTGGGATGCTTGCCCTGGTCAGAAGGGCGAGCGCTTAAAACCGGTTGCTTCATGAGGTACTCAGACAAAGATTTTCTTAACAAGGAACTTAAAAGTGGGAGTTCAAGAGGTACTGTAGTAGTGATAGTGGTTGCAGTAGTCAGTTCAGTAATTGTTTTGGTAGTTGGAGTAGGTATTGCAGTTTATATCCGGAAACAGAGATACATTCAAAAGAAACGAAGAGGTTCAAGTGATGCAGAAAAGTTAGCAAAGACCCTTCAGCATAGTAGCTTGAACTTCAAGTACTCTACACTGGACAAGGCTACAGGGTCTTTTGATGACACTAACAAATTAGGGCAAGGAGGATTTGGAACGGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACACAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGTGTGGAACACAAGAACTTAGTCAGATTGTTAGGTTGTAGTTGTTCAGGACCTGAAAGCCTGCTTGTATATGAATTTCTGCCGAACAAAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAGAGAACTGAACTGGGAAAAGAGATATGAAATTATCATTGGGACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAGTAAGAATAATTCACAGAGATATAAAAGCCAGCAACATCTTATTGGATGCAAAGTTCCGTGCTAAAATAGCAGATTTTGGTTTGGCGAGGTCCTTGCAAGAAGACAAAACCCACATAAGCACAGCTATCGCAGGAACTCTGGGGTATCTAGCGCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGACATATATAGTTTTGGAGTGGTATTGCTAGAGATAGTTACTGGTAGACAGAACAACAGGAGCAAAACATTAGAGTATACGGACAGCCTAGTTATAGTGACATGGAAGCATTTTCAGTCAGGAACTGCAGCACAATTACTTGATCCAAATCTAGGATTGCATGACGACCACAGTGACAATGTTAAGAATGACATTTTAAGAGTGGTCCACATAGGACTTCTATGCACCCAAGAGATCCCTTCATTGAGACCATCTATATCAAAGGTACTACAGATGTTAACAAAAAGGGAAGAAAACCTTCCAGCTCCCTCTAATCCACCCTTCCTCGATGAGAGTACTATGGAACTCCATGACACAAGTGGTGACCCATTTTACCTTCTCAATGCAGCAGATTCAATTGCTACTGTGTCCAATAGCTCTTTTAATCCCAGGTAA 1944 0.4156 MKKVITLISSQWLVFLLIKSLLLSQTAMAEPRTKTVLITCGHELEHNTTIFVPNFVATMDKISEQMRTTGMGKAVTGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNAGRLYLDGCFMRSENYSFFNEYTGPGDRAVCDKTAKKDSSFQAAAKQAVLSAVQDAPNNNGYARGKVAVSGTANESAYVLADCWKTLDTRSCKACLQNASSSMLGCLPWSEGRALKTGCFMRYSDKDFLNKELKSGSSRGTVVVIVVAVVSSVIVLVVGVGIAVYIRKQRYIQKKRRGSSDAEKLAKTLQHSSLNFKYSTLDKATGSFDDTNKLGQGGFGTGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDKNKGRELNWEKRYEIIIGTAEGLVYLHENSKVRIIHRDIKASNILLDAKFRAKIADFGLARSLQEDKTHISTAIAGTLGYLAPEYLAHGQLTEKADIYSFGVVLLEIVTGRQNNRSKTLEYTDSLVIVTWKHFQSGTAAQLLDPNLGLHDDHSDNVKNDILRVVHIGLLCTQEIPSLRPSISKVLQMLTKREENLPAPSNPPFLDESTMELHDTSGDPFYLLNAADSIATVSNSSFNPR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1059 647 Pfam Protein tyrosine and serine/threonine kinase 328 538 IPR001245 GO:0004672|GO:0006468
Lal23g1059 647 CDD STKc_IRAK 330 598 - -
Lal23g1059 647 SMART serkin_6 324 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1059 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 9 628 - -
Lal23g1059 647 Pfam Salt stress response/antifungal 50 132 IPR002902 -
Lal23g1059 647 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Lal23g1059 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lal23g1059 647 Gene3D Phosphorylase Kinase; domain 1 284 396 - -
Lal23g1059 647 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Lal23g1059 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 628 - -
Lal23g1059 647 Gene3D - 144 244 IPR038408 -
Lal23g1059 647 Gene3D - 33 134 IPR038408 -
Lal23g1059 647 ProSiteProfiles Protein kinase domain profile. 324 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1059 647 SUPERFAMILY Protein kinase-like (PK-like) 306 598 IPR011009 -
Lal23g1059 647 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Lal23g1059 647 Gene3D Transferase(Phosphotransferase) domain 1 397 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1059 Lal-Chr23 12328677 12336100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1059 1 647 Receptor kinase-like Gene Family AT1G70520 65.237 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal23g1059 PK_Tyr_Ser-Thr 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1059 - - gmx:100804094 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1059 23 12328677 12336100 Lal23g1059 23 12328677 12336100 ECH