Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1049 ATGGAAAGTTGTGGGATTGAAGAGAGCAGTGTGAGGTTGTTGGATAGTTTTAGCAATTATGGGAGCAGTGAGTCAAGGTGGGTTGATGGCAGTGAAGTAGATTCAATGGATCCAGAGCTTCCTTCATCATGGTCTAATGAAGGTAGAGAAGGATATCACTCACTCAAGAGGAGGCTTGTGAAGAAGCCCAAGAGGGTTGATTCATTTGATGTTGAAGCCATGGAGATTTCTAGAACTCAGGACCACCACTCCAAGGATGCTTCCCTTTTGCCTACTCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATACGGTGACATGGGAACAAGTCCTCTCTATGTTTTCGCTGATGTATTCAGTAAGGTTCCAATTGAATCAGATGTTGATATCTTGGGGGCATTATCATTAGTGATGTACACAATAACACTTATTCCATTAGCGAAGTATGTTTTTATAGTCCTCAAAGCAAATGACAATGGAGAAGGAGGAACGTTTGCACTATACTCCTTGATTTGCAGATTTGCAAATGTGGGTCTGCTTCCAAATCGTCAACAAGCTGACGAGCATATCTCTAGTTACAGGCTTAAACTACCCAGTTTAGAGATGGAAAGGGCTTTAAGAATAAAGGACACTTTGGAAAAGAATAAGTCTTTGAAAACCCTTTTGTTGCTGTTGGTTCTGCTGGGAACTTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATGTCAGTGCTATCTGCCGTAAGTGGGCTTCAGGGTGAAATAGAAAGTTTTGGTACAGAGGAAGTGGTTATTATTTCAATTGTAGTCCTGGTGGCATTGTTCAGCATCCAACAGTTTGGTACCGGTAAAGTGGGTTTCATGTTTGCCCCCATACTTGCTTTGTGGTTCTTTTCTCTGGGTTCTATTGGAGCTTATAATATGGTTAAGCATGATATCACTGTTCTGAGAGCAATCAATCCAGCTTATATTTATTATTTCTTCAAGAAGAACAGGAAACATGCGTGGTCAGCTCTTGGTGGTTGTGTTCTGTGTATTACAGGTGCAGAAGCAATGTTTGCTGATCTGGGTCATTTTTCTGTGGAAGCAATTCAGATTGCCTTCACTTGTGTGGTATTTCCTTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTATTTGATGAAGAACCCGGCGTCTTATGTAAATATATTCTACGATTCTGTTCCAGGTAGTCTCTTCTGGCCAGTATTTGTGATAGCCACACTTGCTGCTATGATTGCTAGCCAAGCAATGATATCTGCTACTTTTTCATGCATAAAGCAATCAATGGCTTTGGGATGCTTTCCCAGGATCAAGATAATTCACACCTCAAGAAAGTTCATTGGTCAAATTTACATCCCAGTAATTAATTGGTTTCTGATGGTCATGTGCATAATTATTGTTGCCATCTTCCAACGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGTTGTCATGATGGTTAGCACATCTTTGGTGACACTTGTAATGCTTTTAATTTGGCAGACCAACTTGTTTGTGGCATTCTGTTTCCTACTCGTATTCGGAACAGTTGAGCTCATTTACATGTCTTCGGTACTTGCAAAAATAGCTGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTCTTCCTTTCTGTGATGTACACATGGAACTATGGGAGCGTATTGAAGTACCAAAGCGAAGTTAGAGAGAAGATTTCATCGGACTTAATGCTTGATCTTGGTTCCGATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTATATAATGAGCTTGTCCAGGGCATTCCTTCCATTTTCGTGCAGTTTCTGCTGACTCTTCCAGCTCTTCACTCTACCATAATTTTTGTCTGCATTAAGTATGTTCCAGTCCCGGTGGTTCCTCAAGAGGAAAGGTTCCTATTTCGAAGAGTGTGCCCAAAAGATTACCATATGTTCCGCTGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTTATCGAAAGTCTCGATGAATTCTTGAGAAAGGAGGCTCAAGAATCTGCCTTGGAGAACAACATTGTTGAAGAAATTGACAGTGTCTTGGTGAAATCGAAGGATTCTAATCTTCCTGCTGATATTGTGACCGAGGAACTTAGGATTCCATTGATGCTTAGTCGAAATTCGGAAGAAACAGGAACTTCTACCTCTCGGAAACCTGCACCAGCATTACCATCATCATGTTATATGTCATCAGATGAAGATCCTAGTCTTGAATATGAACTTTCAGCCCTTAGAGAAGCAATGGCATCAGGATGCACCTATTTGCTTGGACATGGTGATGTGAGGGCAAAGAAAAACTCATTTTTCATTAAGAAATTGGTCATAAATTATTTCTATGCATTTCTCAGAAAGAACTGTAGAGGAGGTACTGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTTGGGATGACTTATATGGTCTGA 2520 0.4123 MESCGIEESSVRLLDSFSNYGSSESRWVDGSEVDSMDPELPSSWSNEGREGYHSLKRRLVKKPKRVDSFDVEAMEISRTQDHHSKDASLLPTLALAFQTLGVVYGDMGTSPLYVFADVFSKVPIESDVDILGALSLVMYTITLIPLAKYVFIVLKANDNGEGGTFALYSLICRFANVGLLPNRQQADEHISSYRLKLPSLEMERALRIKDTLEKNKSLKTLLLLLVLLGTSMVIGDGILTPAMSVLSAVSGLQGEIESFGTEEVVIISIVVLVALFSIQQFGTGKVGFMFAPILALWFFSLGSIGAYNMVKHDITVLRAINPAYIYYFFKKNRKHAWSALGGCVLCITGAEAMFADLGHFSVEAIQIAFTCVVFPCLLLAYMGQAAYLMKNPASYVNIFYDSVPGSLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRIKIIHTSRKFIGQIYIPVINWFLMVMCIIIVAIFQRTTDIANAYGIAEVVVMMVSTSLVTLVMLLIWQTNLFVAFCFLLVFGTVELIYMSSVLAKIAEGGWLPLAFATFFLSVMYTWNYGSVLKYQSEVREKISSDLMLDLGSDLGTVRVPGIGLLYNELVQGIPSIFVQFLLTLPALHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLDEFLRKEAQESALENNIVEEIDSVLVKSKDSNLPADIVTEELRIPLMLSRNSEETGTSTSRKPAPALPSSCYMSSDEDPSLEYELSALREAMASGCTYLLGHGDVRAKKNSFFIKKLVINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1049 839 MobiDBLite consensus disorder prediction 736 751 - -
Lal23g1049 839 PANTHER POTASSIUM TRANSPORTER 12-RELATED 20 839 - -
Lal23g1049 839 TIGRFAM kup: potassium uptake protein 95 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal23g1049 839 MobiDBLite consensus disorder prediction 735 759 - -
Lal23g1049 839 MobiDBLite consensus disorder prediction 22 49 - -
Lal23g1049 839 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal23g1049 839 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1049 Lal-Chr23 12242923 12248932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1049 5 839 Inorganic Solute Cotransporters AT1G60160 72.879 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1049 K03549 - gmx:100814419 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1049 23 12242923 12248932 Lal23g1049 23 12242923 12248932 ECH
Lal15g0492 15 3377435 3383773 Lal23g1049 23 12242923 12248932 LSH