Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1026 ATGAGTGAGTCCGTTTCTTCGACTCGGACGGTTCGACTCGGCCGAGTCCAGCCCCAAGCCCCTGGCCACCGCACCATCTTCTGCAACGACCGCGAGGCTAACCTTCCCGTTCGCTTCAAGGGGAACTCAATATCAACTACAAAGTACAACTTTTTCACTTTTTTCCCTAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCAAATCTCTACTTCCTTACCATCTCAATATTGTCTACCACACCAATCAGCCCTGTGTCTCCGATAACTAATGTGCTTCCTCTATCCGTGGTGCTTCTCCTTTCACTCATTAAGGAAGCTTTTGAGGATTGGAAGCGTTTTCAAAATGACATGGTCATAAACAATAATACGATAGATGTTTTGCAAGATGAAAAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTTGGCGATATTGTGAAGGTTAAGCAAGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACAAATGTAGACTGTGTCTGCTACATTGAGACTGCGAATTTGGATGGGGAAACCAACTTAAAGATTAGGAAAGCATTGGAGAAGACTTGGGATTACCTGATTCCAGAGAAGGCATCCGAGTTTAAAGGCGAAATTCAGTGTGAACAACCGAACAATTCATTGTATACCTTCACTGGAAATCTTATAATTCAAGACCAAACACTGCCTATCAATCCAAACCAACTTCTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTGATTTTTACTGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTCATTTTATTTGCGACTCTCTTTACGATGTGTTTTATCGGAGCCATAGGCAGTGCTATCTTCGTAAACAATAAGTATTTCTACTTACGTCTTGAATCATCAGAGGAGGGCTCAGCCCAGTTTGACCCAAGAAACAGATTTTTGGTTTTCCTTCTGACTATGTTTACCCTCATCACTTTGTACTCAACAATTATCCCCATTTCACTTTATGTTTCAATAGAGATGATAAAATTTATTCAGTGCACTCAATTTATCAACAAGGATTTGAACATGTTCCATAATGAAACAAATACCCCAGCGTTGGCCAGAACATCAAATCTGAATGAAGAACTTGGACAGGTGGAATACATCTTCTCTGACAAAACTGGTACTTTGACAAGAAACTTGATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGATATATGGAAATGGCTTGACTGAAACTGAGAAGGGGTTGGCAGAGCGTAGTGGTGTAAAATTTGAGGAAAATATCACAACCAATGCAGTAAGAGAGAGGGGTTTTAATTTTAATGATGCTAGGCTTATGGGAGGAGCTTGGAGGAATGAGCCGAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCCGAGGGTGATGAATCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGTCTGCTTTGGTTATTGCTGCGAAGAACTTTGGTTTTTTCTTTTACAGATCTCAATCAGCCAAGACTAGAGATGGCGGTATGTCTGGTGCTGGAGGTCACCTTAAAAAAGATGGTGGTCTGTCTTCTGTGTTGGTGCCGATTGGTGGTTTGTGCCTCTGGTTCAAGGTCACTGGTGGTGATTTCAGTTTGTCAGAAGCGTTGTTTTTTGCCAGACGCACACCTACTACAATATATGTTCGTGAATCACATGTTGAGAAGATGGGTAAAATTCAAGATGTGGCATATGAGATTTTGAATGTGCTCGAGTTTAACAGTACAAGGAAGCGCCAGTCTGTTGTATGTCGTTATCCAGATGGGAGGCTTGTATTGTACTGTAAGGGTGCTGATACTGTAATCTATGAGAGATTAACTGATGATTACAATGGTATAAAAAAAGTCACTAGGGAGCATTTGGAACAATTTGGATGTGCTGGACTACGTACACTATGCCTTGCCTACAAAGATTTACACCCTGATGTTTATGAAAGCTGGAATGAAAAGTTCATCCATGCCAAATCTTCTCTACATGATCGTGAAAAGAAGTTAGATGAGGTGGCCGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCCTGTATAGAGACTCTTCAAAGAGCTGGCATTAAAATTTGGGTGCTTACAGGGGACAAGATTGAAACAGCAATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTATTATCAGTTCAGAAACTGATGCAATTAGAGAGGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACGATTTATTAATGAAGAAGTGAAAAGAGAACTCAAGAAGTGCCTCGAGGAAGCACAGAGTTATTTGAGCTCTCTATCTATACCAAAATTAGCACTGGTAATTGATGGTAAATGTCTAATGTATGCATTGGATCCAAGTTTGAGAGTCATGCTGCTGAAATTCAGTTTGAGTTGTCATGCTGTTGTTTGCTGTCGGGTTTCTCCTTTACAAAAAGCTCAGGTCACAAGTTTGGTCAGGAAAGGTGCAAATAAAATAACACTTTGTATTGGTGATGGAGCTAATGATGTCAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGATGGAGGGGATGCAAGCCGTGATGGCTAGTGATTTTGCTATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGATGGTCATATTTTCGAATATGCAAGGTGGTGTTATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGCCAGAGATTCTATGATGATTGGTTTCAGTCATTGTATAATGTTATCTTCACTGCACTGCCTGTGGTTATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTATCGAAGAAGTACCCTGAATTATACATGGAGGGAATAAAAAATGTCTTTTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTCTCTGTCTACCAGTCTCTGGTATTGTTTCATTTTGCGAGTACATCAAGTTCAACTGCTAAAAATCCAGCTGGAAAGATATTTGGGCACTGGGATGTCAGTACAATGGCCTTCACATGTATTGTATTAACCGTTAACTTGCGTCTTCTTATGATATGCAATTCAATCACAAGATGGCATTATTATAGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGTTTTTATATATACGGGGATCAACACTCGTTATGATCGACAGGAGAACTTATATTTTGTCATATATATTTTGATGAGTACATTATATTTCTACCTTACATTGCTACTGGTTCCGGTTGCTGCACTTTTCTGCGACTTTCTTTACCAAGGGGTTCAGAGATGGTTCTTCCCTTATGATTATCAGATTATTCAAGAAATGCATAGACAAGAGTACGACGACATCGGCAGGGAGCAACTAATAGAGATGGGGGGCATTCTTAGCCCAGCTGAGGCGAAGGGCCATGGTGTATCTCAATTGCCACATGAGATATCAAAACATACCGGGTTTGCTTTTGATTCACCTGGTTATGAGTCATTTTTTGCTGCACAGCTTGGTGTTTATGCCCCGCAAAAAGCATGGGATGTTGCAAGACGAGCAAGCATGAAACCTCGGCTAAAGACTGGACAGAAAAAGTAG 3789 0.4072 MSESVSSTRTVRLGRVQPQAPGHRTIFCNDREANLPVRFKGNSISTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSVVLLLSLIKEAFEDWKRFQNDMVINNNTIDVLQDEKWVSIPWKKLQVGDIVKVKQDGFFPADLLFLASTNVDCVCYIETANLDGETNLKIRKALEKTWDYLIPEKASEFKGEIQCEQPNNSLYTFTGNLIIQDQTLPINPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILILFATLFTMCFIGAIGSAIFVNNKYFYLRLESSEEGSAQFDPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINKDLNMFHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGLTETEKGLAERSGVKFEENITTNAVRERGFNFNDARLMGGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDESALVIAAKNFGFFFYRSQSAKTRDGGMSGAGGHLKKDGGLSSVLVPIGGLCLWFKVTGGDFSLSEALFFARRTPTTIYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLTDDYNGIKKVTREHLEQFGCAGLRTLCLAYKDLHPDVYESWNEKFIHAKSSLHDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVEIARFINEEVKRELKKCLEEAQSYLSSLSIPKLALVIDGKCLMYALDPSLRVMLLKFSLSCHAVVCCRVSPLQKAQVTSLVRKGANKITLCIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYFRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVVIVGLFDKDVSASLSKKYPELYMEGIKNVFFKWRVVAIWAFFSVYQSLVLFHFASTSSSTAKNPAGKIFGHWDVSTMAFTCIVLTVNLRLLMICNSITRWHYYSVGGSILAWFIFVFIYTGINTRYDRQENLYFVIYILMSTLYFYLTLLLVPVAALFCDFLYQGVQRWFFPYDYQIIQEMHRQEYDDIGREQLIEMGGILSPAEAKGHGVSQLPHEISKHTGFAFDSPGYESFFAAQLGVYAPQKAWDVARRASMKPRLKTGQKK 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1026 1262 Coils Coil 805 825 - -
Lal23g1026 1262 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
Lal23g1026 1262 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 535 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal23g1026 1262 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 582 1176 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal23g1026 1262 Pfam Phospholipid-translocating P-type ATPase C-terminal 918 1168 IPR032630 -
Lal23g1026 1262 ProSitePatterns E1-E2 ATPases phosphorylation site. 406 412 IPR018303 -
Lal23g1026 1262 Gene3D - 589 722 IPR023299 GO:0000166
Lal23g1026 1262 SUPERFAMILY Calcium ATPase, transduction domain A 121 265 IPR008250 -
Lal23g1026 1262 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 410 737 IPR023299 GO:0000166
Lal23g1026 1262 SUPERFAMILY Calcium ATPase, transmembrane domain M 38 1168 IPR023298 -
Lal23g1026 1262 Gene3D - 104 269 - -
Lal23g1026 1262 SFLD Haloacid Dehalogenase 386 941 - -
Lal23g1026 1262 Pfam Cation transport ATPase (P-type) 501 652 - -
Lal23g1026 1262 SUPERFAMILY HAD-like 399 946 IPR036412 -
Lal23g1026 1262 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 863 969 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal23g1026 1262 Gene3D - 723 930 IPR023214 -
Lal23g1026 1262 PRINTS P-type cation-transporting ATPase superfamily signature 404 418 - -
Lal23g1026 1262 PRINTS P-type cation-transporting ATPase superfamily signature 890 909 - -
Lal23g1026 1262 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 533 - -
Lal23g1026 1262 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 582 1256 - -
Lal23g1026 1262 CDD P-type_ATPase_APLT_Dnf-like 41 1050 - -
Lal23g1026 1262 Pfam E1-E2 ATPase 121 360 - -
Lal23g1026 1262 SFLD p-type atpase 386 941 IPR044492 -
Lal23g1026 1262 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 533 - -
Lal23g1026 1262 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 582 1256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1026 Lal-Chr23 12068166 12083155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1026 6 1261 Primary Pumps ATPases AT1G59820 73.429 0.0 1939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1026 K14802 - gmx:100815547 2095.47