Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1020 ATGTCTCCACAACAATCTAACCCCTACACCATTACCACTCTCTCCATATTCATCTTCTTTCTTCTACTTACACCATTTTCCACTTCAACTTCTCAATCTCCCACATGCTCTTCTCCTTCTAAACTCATAACCCCTTGTCCACCTTTCTCTTCCACTCCTCCTCCTTTCCCTTTCTCTTCTTCACCAGGTTGTGGCCACCCTTCTTTCCAATTCAAATGCAACACTCCACACTCCATTTTCTCCATCAATAATATCTCTTTTTCTCTCCTCACTTATAACCCCAACACTTCTTCCATACTCCTCTCCCCTCACAACAACAAAAACACTACTTGCCCTTCTTCCACCCACTTTCTCTCCATCCCAAACAAACCTATCAACTTCTCTAACTCTCCTTTTACTATCTCAGATTCCTCTTGTTCCCGTCTCTCTTTTCTTCAACCTTGTTCACCTCCAACCCTTCCTAACTGTAGCCATTGCCCTTGGGAATGCCACCTCATCAAGAACCCAAATCACCTTCTCCATGGTTGTGGATCTATGCATCATTCTGCTTCTGACTCTGAACCTAGCTGCCAGAGTGATGTATTGGGCTACCTTGACAAAATGCTAACTTTATTGGGGATACAAGTTGAGTGGGATGAAGCTCAAGACCCTTACTTTATAAAGTGTAGAGATTGCAAAAACAACAAAGGGTTGTGTGGGTTCAATTCTTCAAACCCAGATAAGCAGTTCTTATGCTTCCACTCACAATCTACAATCTCACCACTATGGATTGGAAAGGTTAAGCCAAATAAAAAAGCTGTTTTGACCCTAGTAATTGTGTTAACCTCTTTGCTTCTTCTTGTGTCTGTTGTTACTGCACTTTTTCGATATAAGAGGTTAAGGTTCAAACAATCACCATCTTGTGAAGAGGATCCAACTACCATTTTTCTTCATAACCAACGTTCCCTTAGTCTTCTTCCTCCAACATTCACCTATGAAGAGTTGGACTCTTCAACCAACCACTTCGACCCCAAACGCAAAATTGGCGATGGTGGCTTCGGTTCTGTCTACCTCGGCCATCTCTGTGATGGAAGACTCGTCGCCGTGAAGTACCTCCACCGCCCCAACACCACCAGAAAAGCCTTTTCCAACAAGTCATTCTGCAATGAAATTCTCATTTTATCCTCTCTCAATCACCCTAACCTAGTGAAGCTACATGGTTATTGCAGCGACCCTAGAGGGTTGCTCTTAGTCTATGATTATGTCCCAAATGGAACCTTAGCAGATCATATTCATGGCACAATGAACTTACACTCGCTAACTTGGCAGGTGAGGCTTGACATTGCGCTTCAAATTGCAATGGCGATGGAGTATCTACACTTCTCTGTGGTGCCACCAATTGTGCATAGAGACATAACCTCATCTAATATTTTCATAGAAAAAGATATGAGAATTAAAGTTGGAGACTTTGGTCTCTCTAGGCTCTTGGTAATGCAAGAAAACTCATCTTCTTCAAATGGGTATGTGTGGACGGGTCCCCAAGGAACACCAGGGTATTTGGACCCGGAATATCACCGATCGTTCCGGTTAACCGAGAAGAGTGATGTGTACAGCTTCGGTGTGGTATTGTTGGAGCTTATTTCTGGGTTGAGAGCGGTGGATCAGAAGAGGGACAAGAGGGAAGTGGGGTTGGCTGATATGGTTGTGTCTAGGATTCAAATGGGTCAGCTTGATCGGGTTGTGGATCCGGTTTTGAAAAGGGAGGAAGAGGCGGTGGTGCAGAATGTTGCTGCGGTGGCGGAGCTAGCTTTCCGGTGTGTGGCGGCGGATAAGGATGATAGGCCGGATAGTAAGGAGGTGGTGTTGGAACTGAAACAGGTTCGGAGCCGGGTCAGTGAAAGAGTGTGA 1887 0.4473 MSPQQSNPYTITTLSIFIFFLLLTPFSTSTSQSPTCSSPSKLITPCPPFSSTPPPFPFSSSPGCGHPSFQFKCNTPHSIFSINNISFSLLTYNPNTSSILLSPHNNKNTTCPSSTHFLSIPNKPINFSNSPFTISDSSCSRLSFLQPCSPPTLPNCSHCPWECHLIKNPNHLLHGCGSMHHSASDSEPSCQSDVLGYLDKMLTLLGIQVEWDEAQDPYFIKCRDCKNNKGLCGFNSSNPDKQFLCFHSQSTISPLWIGKVKPNKKAVLTLVIVLTSLLLLVSVVTALFRYKRLRFKQSPSCEEDPTTIFLHNQRSLSLLPPTFTYEELDSSTNHFDPKRKIGDGGFGSVYLGHLCDGRLVAVKYLHRPNTTRKAFSNKSFCNEILILSSLNHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHIHGTMNLHSLTWQVRLDIALQIAMAMEYLHFSVVPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVMQENSSSSNGYVWTGPQGTPGYLDPEYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQKRDKREVGLADMVVSRIQMGQLDRVVDPVLKREEEAVVQNVAAVAELAFRCVAADKDDRPDSKEVVLELKQVRSRVSERV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1020 628 ProSitePatterns Tyrosine protein kinases specific active-site signature. 460 472 IPR008266 GO:0004672|GO:0006468
Lal23g1020 628 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 625 IPR045274 GO:0007166
Lal23g1020 628 CDD STKc_IRAK 341 619 - -
Lal23g1020 628 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 35 625 - -
Lal23g1020 628 ProSiteProfiles Protein kinase domain profile. 335 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1020 628 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Lal23g1020 628 Gene3D Phosphorylase Kinase; domain 1 311 414 - -
Lal23g1020 628 SUPERFAMILY Protein kinase-like (PK-like) 315 617 IPR011009 -
Lal23g1020 628 Gene3D Transferase(Phosphotransferase) domain 1 415 627 - -
Lal23g1020 628 Pfam Protein kinase domain 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1020 Lal-Chr23 12026633 12029350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1020 46 626 Receptor kinase-like Gene Family AT1G69910 62.126 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal23g1020 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1020 - - pmum:103321651 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1020 23 12026633 12029350 Lal23g1020 23 12026633 12029350 ECH