Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1015 CTTGGAAGCATTACTAAACCATATTCTTCTACCATCTTGGTGCACACTCTTTCTACTTTGAGTAACATTGACCAAACACTCACTCACTCACTCACTCTTTTCATAAAATTCATCATGAGCTATCTTCTTCAGCCTCATGCTAATGATTGTGAACCAAACAATAGCTCTAAAATTCTGCCAACCATTTCAGAATTTCATACCACATTTGATGTGGAAGCCATGAAATCAATAGAAACTGGTGAAGCAAATCAAGAGGAAGGTGTTTTCTTGACTTGGAAGGATCTTTGGGTGACTGTTTCAAATGGAAAGAATGGAAGGAAACCAATACTTGAAGGTGTAAAGGGCTATGCAAAACCAGGACAACTCTTAGCTATAATGGGTCCTTCAGGTTGTGGCAAGTCCACACTTCTTGATGCTTTAGCAGGAAGATTAAGTTCAAAGATAAAGCAAACAGGGAATATTTTAATCAATGGACACAAACAAGCACTGGCTTATGGAACATCTGCATATGTAACAGAAGATGATACTATTTTGACAACTCTAACAGTTGGAGAAGCTGTATACTACTCAGCCCAGCTCCAATTGCCTGATTCCATGTCCAAGTCAGAGAAAAAGGACAGAGCAGATTTTACCATCAGAGAAATGGGTCTGCAAGATGCGGTTGACACCAGAATCGGAGGGTGCGGATCTAAAGGCATTAGTGGTGGACAAAAGAGGAGAGTTAGCATATGTATTGAGATCTTAACACGCCCGAAACTCCTCTTCCTAGACGAACCGACTAGTGGACTTGATAGTGCAGCTTCTTATTATGTTATGAGTAGAATTTCCAGCTTAAATCAAAAGGATGGCATTCAAAGGACTATTATAGCATCAATCCACCAGCCAAGTAATGAAGTTTTTCAACTTTTCCACAACCTTTGTCTTCTGTCTTCCGGGAAAACTGTATACTTTGGACCTGTCTCTGCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCCATGCCCAAGTCTTCAGAATCCTTCTGATCACTTTGTAAAAACAGTCAACAAAGACTTTGTACAAGACACTGAGAAAGGATTAGCTGGAGGGCTTAGCACAGAAGAATCAATTCATATTCTTGCTAAATTGTATGATTCATCCGAAATTAATCACCAAGTTGAAAAAGAAATAGCTCAAATAATAGAAAGGGACTCAGTCTCAATGGTGAATGGAAGCCATGCTAACTTTTATACCCAATGCCTCATTCTCACAAGAAGATCTTTCCTGAACATGTATCGCGAAGTTGGCTATTACTGGCTACGCTTACTTATCTATGGTGCCTTGGCTTTAAGTCTTGGAACCATGTTCTTTGACATTGGCTCAAGCAGTGAATCAATTCAGGCCAGAGGTTCTCTGCTTGTGTTTGTTGTTACATTCCTGACCTTCATAACTGTTGGAGGGTTCCCTTCATTTGTGGAGGATATGAAGGTGTTCGAAAGAGAAAGACTAAATGGCCATTATGGTGTCACTGCATTTGTCATCGGCAACACCTTATCTGCTATTCCATTCTTGCTATTGATATCATTAATCCCAGGAGCACTGGTTTACTACCTAGTTGGACTTCACCAAGGACATGAACAATTTTTGTATTTTACATCTGTGCTTTTTATTTCTGTCTTGTTGGTTGAGGGTCTCATGATGATTGTCACAAGCATGGTTCCAAATTTCCTGATGGGCATAATCTTCGGTTCCGGAATCTTGGGAGTAATGATGTTAGATGGTGGGTTCTATAGGTTACCAAGTGATATTCCTAAGCCATTTTGGAGATACCCTTTGCACTACATTTCCTTCCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAGTTCCAAGGTCTAAAATTCACTAGTAAACAACTTGGAGGGCCTGCAAACTTTAGTGGTGAAGAAATACTTAGAAACTTATGGCAAGTGGACATTAATTATTCTAAGTGGTTGGACCTTGCTATCTTGGCTGGAATGGCTATAGTATATAGGATTCTGTTCTTGGTTATCATTAAGTGCTTTGAGAAGATGAAGCCTATTGTCACAGCTATTAATTTTCCCCAACCAAATTTTAGGTTCACTAAAGTCACCAGAAGCAATGAGATTGAATAG 2136 0.3942 LGSITKPYSSTILVHTLSTLSNIDQTLTHSLTLFIKFIMSYLLQPHANDCEPNNSSKILPTISEFHTTFDVEAMKSIETGEANQEEGVFLTWKDLWVTVSNGKNGRKPILEGVKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLSSKIKQTGNILINGHKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAQLQLPDSMSKSEKKDRADFTIREMGLQDAVDTRIGGCGSKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMSRISSLNQKDGIQRTIIASIHQPSNEVFQLFHNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQNPSDHFVKTVNKDFVQDTEKGLAGGLSTEESIHILAKLYDSSEINHQVEKEIAQIIERDSVSMVNGSHANFYTQCLILTRRSFLNMYREVGYYWLRLLIYGALALSLGTMFFDIGSSSESIQARGSLLVFVVTFLTFITVGGFPSFVEDMKVFERERLNGHYGVTAFVIGNTLSAIPFLLLISLIPGALVYYLVGLHQGHEQFLYFTSVLFISVLLVEGLMMIVTSMVPNFLMGIIFGSGILGVMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLKFTSKQLGGPANFSGEEILRNLWQVDINYSKWLDLAILAGMAIVYRILFLVIIKCFEKMKPIVTAINFPQPNFRFTKVTRSNEIE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1015 711 Pfam ABC-2 type transporter 411 623 IPR013525 GO:0016020|GO:0140359
Lal23g1015 711 Pfam ABC-2 type transporter 293 348 IPR043926 GO:0140359
Lal23g1015 711 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 66 699 - -
Lal23g1015 711 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 336 IPR003439 GO:0005524
Lal23g1015 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 325 IPR027417 -
Lal23g1015 711 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524
Lal23g1015 711 Pfam ABC transporter 111 261 IPR003439 GO:0005524
Lal23g1015 711 Gene3D - 90 358 IPR027417 -
Lal23g1015 711 SMART AAA_5 119 308 IPR003593 -
Lal23g1015 711 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 66 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1015 Lal-Chr23 11989097 11998269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1015 117 318 Calmodulin-binding Proteins AT2G36910 27.053 1.07e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1015 K05681 - gmx:100789571 1120.15