Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1004 ATGTTACAGCTTTCTATTCAACGATTGAAAAAGTTCAACTTTCTGATGCATCAGATCTCTGCTTTGGGAAATTCCCATTTCTCAACATCTTCCATTAATCGTAATCCTTTGAGGGTTCCAAATCTTATTGGAGGGAATTTTCTTGACTCAAAATCATTGACTTTCATCGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCCTTGACCACAGATGATGAGTTCAAATCTGCTGTATCTGCAGCAAAGAAGGCATTCACATCATGGCGCAACACTCCAATTACGACACGCCAACGTGTCATGTTGAAGTTCCAGGAGCTTATACGCAGAGATATGGATAAACTTGCTCTGAGTGTGACCACAGAACAAGGAAAAACATTAAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGAGAGTATGTTTCTAATGTATCACATGGAATTGATACTTTCAGCATTAGAGAACCACTTGGTGTTTGTGCTGGTATCTGTCCTTTCAATTTTCCTGCAATGATTCCCTTATGGATGTTCCCAATGGCTGTGACCTGTGGTAATACCTTCATTCTGAAGCCATCAGAGAAAGACCCTGGTTGTTCTCTATTGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGTGGGTGTCTTAAATATAGTTCATGGAACTCATGATATTGTGAATGCCATTTGTGATGATGACAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCTGGTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCAAAAAATCATGCGATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGGAAAATAAACTCATTAAGCGTGCACAAGCTCTTAAAGTAAATGCTGGAACTGAACCTGATGCAGATCTTGGTCCAGTCATCAGCAAACAGGCAAAAGAGAGAATACACAGATTAGTTCAATCCGGGGTTGAAAGTGGTGCCAAACTACTGCTTGACGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTGTTGGCCCAACCATCTTATCAAATGTCACTGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGATAACTTGGAAGAGGCCATAAACATTGTCAACAGAAACAAGTATGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCTGCTAGGAAATTTCATTCTGAGATTGAAGCTGGGCAGGTTGGTATCAATGTCCCTATTCCAGTTCCTTTGCCATTTTTCTCATTTACTGGCAACAAGGCATCATTCGCAGGCGACCTCAATTTCTATGGCAAGGCAGGAGTTAACTTTTATACACAGATCAAAACAGTAACCCAGCAATGGAAAGATTCAGTTAGTGAAAGCAAGATTAACATGGCAATGCCAACCTCTCAAAAATCTTGA 1557 0.4104 MLQLSIQRLKKFNFLMHQISALGNSHFSTSSINRNPLRVPNLIGGNFLDSKSLTFIDVINPATQEVVSQVPLTTDDEFKSAVSAAKKAFTSWRNTPITTRQRVMLKFQELIRRDMDKLALSVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFILKPSEKDPGCSLLLAELALEAGLPVGVLNIVHGTHDIVNAICDDDNIKAISFVGSNVAGMHIYSRAAGKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRENKLIKRAQALKVNAGTEPDADLGPVISKQAKERIHRLVQSGVESGAKLLLDGRNIVVPGYESGNFVGPTILSNVTANMECYKEEIFGPVLLFMEADNLEEAINIVNRNKYGNGASIFTTSGVAARKFHSEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSVSESKINMAMPTSQKS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1004 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 465 495 IPR016162 GO:0016491
Lal23g1004 518 SUPERFAMILY ALDH-like 33 500 IPR016161 GO:0016491
Lal23g1004 518 Pfam Aldehyde dehydrogenase family 317 495 IPR015590 GO:0016491
Lal23g1004 518 Pfam Aldehyde dehydrogenase family 48 315 IPR015590 GO:0016491
Lal23g1004 518 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 23 518 - -
Lal23g1004 518 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 41 499 IPR010061 GO:0004491
Lal23g1004 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 316 IPR016162 GO:0016491
Lal23g1004 518 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 317 464 IPR016163 GO:0016620
Lal23g1004 518 CDD ALDH_F6_MMSDH 39 499 IPR010061 GO:0004491
Lal23g1004 518 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 23 518 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1004 Lal-Chr23 11924090 11931543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1004 15 483 Aldehyde Dehydrogenase Gene Family AT2G14170 75.051 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1004 K00140 - gmx:100791508 902.508