Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1003 ATGAGCACTACTACTATGTTGGAGTCTTTAGCTTATTGTCAAAGTTTCAAGGGTTATGACCTCACCAAACAGAAAAGTCCTGGTTACTTCCGTGCCATTTCACGAACCTGTAGAAGTTCTATTTTCATGCTTCATTCAGTTAACAAGCAAGTGTCACAACTATCACATGGTGGTAGTCACAGGATAATTCATAGGACTCATGTCTCAGAAAATTTATTTAAAAGCACGCCTCTCATCGTTCCACCATTTCCATATTGGAAAGAATTCTGTTTATCTAAAGATAAGCCATTGCGTAGGGAACGGTTACTAACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATTAATGATCTAGGATCGGATACTCTTACCTTCTTGGCTGTGACTGTCATAATTGTGCCGACATTCAAGTTACTTAAAGTCAGCCCAATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTGAAAGCTCTCGCAAAATATGCCTTTGTGCTGGGATTGGCTCAGGTTGTACTATCTACTTTAGCATTTACTGCTTTCGAACTTCCACCAAATGGGGCTATTGGAACAAAAGTTTTGGAATTTCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGCGTTGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTACCTACAAGATTTGGTTCAGCAACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTATCCCTCTTCTCGTCATTCTTCCGATACTGGAGAGCCAGACTATGTCTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTGGGTGGATTAGGTCTTCTTTCTTTCGGAACAAAGTACATTCTCAGAAGAGTTTTCGAGGTTGTTGCAGAAACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTGTTGCTGGGACTTCACTAATCACACAGCGTTTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCCATCTTAGCAGAGACAAATTTCAGGACCCAGATCGAAGCTGACATAAGGCCGTTTAGAGGCTTGCTTCTTGGGTTATTTTTTCTAACTACAGGGACTTCAATTGATATGCAGATCCTTTTGCGAGAATGGCCAAATGTACTTGCACTCTTGGCGGGTTTAATTGCTATCAAGACATTGATCATAACTGCGATCGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTTTATCCCAGGGAGGCGAATTTGGATTTGTAGTTTTCTCTTTAGCAAATAGGCTTGGAGTGCTTCCACTTGAGCTCAATAAGCTGCTCATTATTGTTGTTGTATTGTCGATGGCATTAACACCGCTTCTGAATGAAGCTGGAAGAAGGGCTTCTAGTTTTATTGACGACAAATCTGATGCTGAGAATAAAGCTTCTGAGGCGGTTAACTTTGATGCCAGTGAACCAGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGGGCAATCCGCTGGCTTCAAGAGGAGATAGTGGTGCAATGGGATGGCCTTATGTGGCTTTTGATCTTGACCACAAAGTAGTACAGGCTGCTAGAAAAATTGGTTTTCCTATTCTCTATGGAGATGGATCACGTCCGGATGTTCTTCAATCTGCCGGTATCAATTCTCCAAAAGCTATCATGGTTATGTACACCGGGAAGAAGAAAACAATTGAAGCTGTTCAGAGGCTACGTTCGACTTTTCCTGCAGTCCCAATCTACGCCAGAGCTCAAGATCTCAAGCATCTTTTGGATCTGAAGAAATCTGGTGCAACAGATGCCATTTTGGCAAATGCAGAGACTAGTTTGCAGCTGGGTTCTAAGCTTATGAAAGGCCTTGGTGTGATGTCTGATGATGTAACATTTCTGAGTCAGCTTATTAGAGATTCCATGGAGTTACAAGCTCAAGAAGCGGTCAACCAGTCTGAATATCGTGAATTAGATATTATGAAACCGCTGCAGGTAAAAGTTTCGGACATGATGGAGGCACGTGTACCAGTAGCTACTACTTCCCCGGAATATGAATTATCAGAACTGAAACAGAAGGATCTAGCTTCCTTGAGTAGAATTCAAAGGGAAGTAGATGCTGAAGAAGAAGATTATGAACTAAATCAAGGTGTTAATTCAGAAGGAAATGGTGTTATATATAGCAAACAAGGTACTAAAGAAAGCTCAATAGTTGAAACAGAAGATGCTATAGGACAAAAGAATCAGGTGGACCCATAA 2439 0.4178 MSTTTMLESLAYCQSFKGYDLTKQKSPGYFRAISRTCRSSIFMLHSVNKQVSQLSHGGSHRIIHRTHVSENLFKSTPLIVPPFPYWKEFCLSKDKPLRRERLLTNVAYDVAGAVEVINDLGSDTLTFLAVTVIIVPTFKLLKVSPILGFFFAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFVLGLAQVVLSTLAFTAFELPPNGAIGTKVLEFLFHSRSDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVIPLLVILPILESQTMSEESIWPMLAQESLKALGGLGLLSFGTKYILRRVFEVVAETRSSEAFVALCLLTVAGTSLITQRLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQILLREWPNVLALLAGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNEAGRRASSFIDDKSDAENKASEAVNFDASEPVVILGFGQMGQVLANFLGNPLASRGDSGAMGWPYVAFDLDHKVVQAARKIGFPILYGDGSRPDVLQSAGINSPKAIMVMYTGKKKTIEAVQRLRSTFPAVPIYARAQDLKHLLDLKKSGATDAILANAETSLQLGSKLMKGLGVMSDDVTFLSQLIRDSMELQAQEAVNQSEYRELDIMKPLQVKVSDMMEARVPVATTSPEYELSELKQKDLASLSRIQREVDAEEEDYELNQGVNSEGNGVIYSKQGTKESSIVETEDAIGQKNQVDP 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1003 812 Pfam Sodium/hydrogen exchanger family 126 511 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal23g1003 812 MobiDBLite consensus disorder prediction 767 812 - -
Lal23g1003 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 52 769 - -
Lal23g1003 812 ProSiteProfiles RCK N-terminal domain profile. 542 674 IPR003148 GO:0006813
Lal23g1003 812 Gene3D - 122 518 IPR038770 -
Lal23g1003 812 Pfam TrkA-N domain 543 666 IPR003148 GO:0006813
Lal23g1003 812 Gene3D - 542 712 - -
Lal23g1003 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 52 769 - -
Lal23g1003 812 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 543 681 IPR036291 -
Lal23g1003 812 MobiDBLite consensus disorder prediction 776 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1003 Lal-Chr23 11908249 11921227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1003 1 731 Inorganic Solute Cotransporters AT4G04850 71.956 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1003 - - aprc:113858933 1261.13