Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0965 ATGGCTGGTCGCTATGATAACCCTTTCGAAGATGAAGTTAACCCATTCTCTAATCCTGGAAGTGTTGCCCCGGCAAAAAATTCGAGGCTTTCACCTCTTAAGCCAGCACATGCTGATTATAATTATGGCTTTGGTGAAACTGTTGATATAGCTCTTGATACATCATCGGATTTGAAAAAGAAGGAGAAGGAACTCCAATCCAAGGAGGCTGAATTGAATAAACGAGAACAGGATTTGAGACGGAGAGAAGAAGCTACTGCAAGAGCTGGAATTGTTATCGAGGAGAAGAATTGGCCACCATTTTTCCCAATTATTCATCATGATATTCCTAACGAAATTCCAGTTCATCTTCAAAGACTGCAATATGTTGCATTTGCTACATTTTTAGGATTAACGTTGTGCCTTTTCTGGAATGTTATAGCTGTCACTGCTGCTTGGATTAAGGGTGAAGGTGTAAAAATATGGTTGCTTGCTATTATCTACTTAATAGCAGGGGTTCCTGGTGGATATGTTCTCTGGTATCGCCCCTTATATCGTGTTTTTAGGAATGAAAGTGCTTTGAAATTTGGATGGTTTTTCATGGTTTACCTGATTCACATAGGATTCTGCATCGTAGCTGCAGTTGCTCCTCCTATAGTTTTCAATGGAAAATCCCTGACAGGCATTCTGTCTGCCATAGATGTTGTTGGTCACCATGTTTTGATTGGGGTCTTCTACTTCATTGGCTTTGGATTATTCTGCCTTGAAATTTTGGTCAGCCTTTGGGTTATTCAGCAAGTATACATGTACTTCCGTGGCAGTGGTAATGCGGCAGCGATGAGACAAGAGGTTTCGAGGGGAGTACTGAGAGCTGCAGTATGA 861 0.4135 MAGRYDNPFEDEVNPFSNPGSVAPAKNSRLSPLKPAHADYNYGFGETVDIALDTSSDLKKKEKELQSKEAELNKREQDLRRREEATARAGIVIEEKNWPPFFPIIHHDIPNEIPVHLQRLQYVAFATFLGLTLCLFWNVIAVTAAWIKGEGVKIWLLAIIYLIAGVPGGYVLWYRPLYRVFRNESALKFGWFFMVYLIHIGFCIVAAVAPPIVFNGKSLTGILSAIDVVGHHVLIGVFYFIGFGLFCLEILVSLWVIQQVYMYFRGSGNAAAMRQEVSRGVLRAAV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0965 286 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 285 - -
Lal23g0965 286 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 285 IPR007273 GO:0015031|GO:0016021
Lal23g0965 286 Coils Coil 51 85 - -
Lal23g0965 286 MobiDBLite consensus disorder prediction 1 29 - -
Lal23g0965 286 Pfam SCAMP family 95 266 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0965 Lal-Chr23 11694483 11699438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0965 1 286 Miscellaneous Gene Families AT1G11180 68.259 1.14e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0965 K19995 - gmx:100795535 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0654 16 4208472 4214315 Lal23g0965 23 11694483 11699438 LSH
Lal23g0965 23 11694483 11699438 Lal11g0154 11 1009997 1019943 PCT
Lal11g0154 11 1009997 1019943 Lal23g0965 23 11694483 11699438 PCT