Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0960 ATGGATAATACTATAGTACTAAAGCTGACAAGTTTATTATACACCTTGTCTCTTTTACTTTTTCTATCTTTTAAGCCTATAGCTTCTTCTTCTAGACATAGGCAATGGAATGGTGGGAGGAAATTGAGCTTTGGTGATAATGGTGATCTTGTTACTAACTTGCCTAGTCAACCTCATGTAGATTTCCAGCACTATGCTGGCTATGTCATGGTTAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTTTATGAAGCTATGACCAATCCACAAGAGAAGCCATTAGTGCTATGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTTGATAGTGATGGCCAGGGCCTTAAATTTAATAACTTCTCATGGAACAGAGAAGCCAACATGTTATTCCTAGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCAAATACAACCAGTGATTATGAACAATTGGGAGATGACTTAACAGCTAATGATGCTTACTCTTTTCTACACAATTGGTTCCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGGGAAAGTTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTTATTCTTGATAGGAACAATGAACCCTCCCTTCATATTAATCTCAAGGGAATTTTGCTAGGTAACCCTGAAACATCTGATGCTGAGGACTGGATAGGTCTAGTTGATTATGCTTGGAGCCATGCTGTAATATCTGATGAAACTCACAAAACAATCAGAAGAAGTTGTGACTTTAACAGCAGTGATCCATGGACTAATGAAGATTGTACTAAAGGTGTGGATGAAGTACTCAAACAGTACAAGGAAATTGATATTTACAGCCTCTATACTTCTGTCTGCTTTGCCAGTACCGCGAGTTCGAACGATCAATCGATGCAAAGGCGCTCGTTAAGAATGATGCCTAGGATAATGGGTGGTTATGATCCTTGCTTGGATGGTTATGCTAAAGCTTATTATAATAGACCAGATGTTCAAAAGGCTCTGCATGCTAGTGATGGTCACAATCTAAAGAATTGGACTATTTGCAACAACAAGATATTTGATGATTGGGCAGATTCTATGCCATCTGTTATCCCAATTTACAAGAAGCTTATTACAGCAAAACTTAGGATTTGGGTTTACAGTGGAGACACTGATGGTAGAGTACCAGTGTTGTCAACAAGGTACAGCTTAAGTACTCTATCTTTGCCTGTTACTAAGCCATGGAGTCCTTGGTACCATGAAAATCAGGTTAGTGGATGGTATGAAGAATATGAGGGGCTTACATTTGCAACATTTAGAGGAGCTGGCCATGCAGTTCCATGTTTTAAACCAAGCAACTCACTTGCATTTTTCTCCTCTTTTCTTCGTGGAGAATCACCACCTTCTAAAAAATAA 1443 0.3929 MDNTIVLKLTSLLYTLSLLLFLSFKPIASSSRHRQWNGGRKLSFGDNGDLVTNLPSQPHVDFQHYAGYVMVNETNGRALFYWFYEAMTNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGQGLKFNNFSWNREANMLFLESPVGVGFSYSNTTSDYEQLGDDLTANDAYSFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELILDRNNEPSLHINLKGILLGNPETSDAEDWIGLVDYAWSHAVISDETHKTIRRSCDFNSSDPWTNEDCTKGVDEVLKQYKEIDIYSLYTSVCFASTASSNDQSMQRRSLRMMPRIMGGYDPCLDGYAKAYYNRPDVQKALHASDGHNLKNWTICNNKIFDDWADSMPSVIPIYKKLITAKLRIWVYSGDTDGRVPVLSTRYSLSTLSLPVTKPWSPWYHENQVSGWYEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLRGESPPSKK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0960 480 SUPERFAMILY alpha/beta-Hydrolases 47 474 IPR029058 -
Lal23g0960 480 Gene3D - 379 473 - -
Lal23g0960 480 Gene3D - 332 370 - -
Lal23g0960 480 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Lal23g0960 480 Gene3D alpha/beta hydrolase 46 304 IPR029058 -
Lal23g0960 480 Pfam Serine carboxypeptidase 58 473 IPR001563 GO:0004185|GO:0006508
Lal23g0960 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Lal23g0960 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Lal23g0960 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Lal23g0960 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Lal23g0960 480 PANTHER CARBOXYPEPTIDASE 11 477 - -
Lal23g0960 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 477 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0960 Lal-Chr23 11656254 11661866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0960 335 474 Calmodulin-binding Proteins AT2G22960 33.333 2.61e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0960 K16297 - gmx:100815993 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0658 16 4252460 4256486 Lal23g0960 23 11656254 11661866 LSH