Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0959 ATGGACAGCACAGATTCATCAACATGCTTTCAGCATCCTCAACTCCCTCCAGGGTTTCGGTTCCACCCAACAGATGAAGAACTCGTAGTTCACTACCTCAAGAACAAAATTGCATCTATTCCCCTTCCTGTGTCCATCATCGCTGAGGTTGATATCTACAAGTTTGACCCTTGGGAGCTACCAAGTAAAGCAGTGTTTGGTGAGCAAGAGTGGTATTTCTTCAGTCCAAGGGATAGGAAGTACCCGAATGGGGCAAGGCCAAACAGAGCAGCTACTTCTGGGTATTGGAAAGCCACTGGAACTGATAAGCCTATAGTAACATCTTATGGGCATCAAAAAGTTGGAGTGAAAAAAGCACTTGTTTTTTATGGTGGGAAGCCTCCAAAAGGAGTTAAAACCAATTGGATCATGCATGAGTATAGGGTTCTTGATAATAATAATAATAATAATAATAATAATAGTTCCATTATTTCTACCTCTAATCCACTTCCTCTGCCTTCTGATCCTCCACACAGTAACAAGAAATCCCTCAGGCTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACAACAATAGCACAGTGCCAAGGCCACCCTTGATGGATCATGATAATGAGCTTTCTATGGAGACCATGCAACCTACTATATCAACTTTGTCAATGGCTAATTACACAAACCATAACTCTAAACCTCCATCTTCAAGAAGTAATGGCTATGCACCACTTGCACTTGATCAAAATGATGACAACTTCTTCAATGGAATCTTAGCAGCTGATCAGAACATGCAAAATGGGTTAATATCTTCCTCTCCAAGCAAACGATTTCGTGGTGATCTTAATGGTGGAAACATCACCATTGCTGAGGAAAACAATTCATTTGTGTCTTTGCTTAGCCAAATTCCTCAAAATGCAACGTATCACTCAAATGCAATTCTTGGGGATGCTGTAATGAGGCAACAATTTCAACTTCCAGGCATAAATTGGAACTAA 993 0.4038 MDSTDSSTCFQHPQLPPGFRFHPTDEELVVHYLKNKIASIPLPVSIIAEVDIYKFDPWELPSKAVFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIVTSYGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRVLDNNNNNNNNNSSIISTSNPLPLPSDPPHSNKKSLRLDDWVLCRIYKKNNNSTVPRPPLMDHDNELSMETMQPTISTLSMANYTNHNSKPPSSRSNGYAPLALDQNDDNFFNGILAADQNMQNGLISSSPSKRFRGDLNGGNITIAEENNSFVSLLSQIPQNATYHSNAILGDAVMRQQFQLPGINWN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0959 330 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lal23g0959 330 PANTHER NAC TRANSCRIPTION FACTOR 56 1 267 - -
Lal23g0959 330 MobiDBLite consensus disorder prediction 151 174 - -
Lal23g0959 330 ProSiteProfiles NAC domain profile. 15 190 IPR003441 GO:0003677|GO:0006355
Lal23g0959 330 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 267 - -
Lal23g0959 330 SUPERFAMILY NAC domain 7 190 IPR036093 GO:0003677|GO:0006355
Lal23g0959 330 Gene3D NAC domain 24 195 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0959 Lal-Chr23 11653179 11655038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0959 5 330 NAC Transcription Factor Family AT1G61110 52.991 6.62e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal23g0959 NAM 2.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0959 - - gmx:100797132 459.914