Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0938 ATGGAGGAAGATAATTCAATTTCTTCAGGGTATAAGGAATACGTGGCAGGCTTGCTCGCTGGGGTTTCAACTGTAGCCATTGGCCACCCCTTTGACACCGTGAAGGTGAAGCTGCAAAAACACAACACAGAAGCACATGGGATTCAGTATAGAAGTGCATTGCATTGCACTGCTAGGATATTGAAGACTGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGTTGGAATGGCTTTTGAAAGTTCACTTCTTTTTGGCATTTATTCCCAGACAAAACAGTCCCTTCAGGGCGCTGAGCAAAGTGGTGAACCACAACCCCGAGTGATAATACCATCTGCAGCCTATGGTGGTGCCATTATCAGTTTTGTGTTATGTCCAACAGAGCTGGTAAAGTGTAGGATGCAGATCCAAGGCACTGATTCTTTGGTTCCCAAATCCAGTCGATACAGCGGTCCCCTTGATTGTGCCATTAAAACTGCAAAAACTGAAGGGGTAACAGGAATATTTCGTGGAGGTTGTACAACACTGCTTAGAGAATCTATTGGGAATGCCGTCTTTTTCAGCGTATACGAATATGCACGCTATTACATGCATTCACATGTCAAAGCTTCTAAGTCTAATCACAGCAACCTCTCTGATATTGGAATTGGGATTGTTACTGGTGGCCTTGCTGGTGTATCATTTTGGTTGGCAGTTTTACCCCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCTGATAAACACTGTTCAAGGAATCCTTTTCAGGTCCTGGGTTCGGTTTACAGAAGGGCCGGATTGAAGGGGTGCTATGCGGGTCTGGCTCCTACAGTAACTAGAGCAGTTCCTGCAAATGCAGCAGCAATTGTCACCTGGGAGCTAGCAATGAAATTATTAGGCATTAAGCATGACTAA 924 0.4416 MEEDNSISSGYKEYVAGLLAGVSTVAIGHPFDTVKVKLQKHNTEAHGIQYRSALHCTARILKTEGIKGLYRGATSSFVGMAFESSLLFGIYSQTKQSLQGAEQSGEPQPRVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSGPLDCAIKTAKTEGVTGIFRGGCTTLLRESIGNAVFFSVYEYARYYMHSHVKASKSNHSNLSDIGIGIVTGGLAGVSFWLAVLPLDVAKTLIQTNPDKHCSRNPFQVLGSVYRRAGLKGCYAGLAPTVTRAVPANAAAIVTWELAMKLLGIKHD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0938 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 97 IPR018108 -
Lal23g0938 307 SUPERFAMILY Mitochondrial carrier 9 296 IPR023395 -
Lal23g0938 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 199 IPR018108 -
Lal23g0938 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 301 IPR018108 -
Lal23g0938 307 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 7 134 - -
Lal23g0938 307 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 134 306 - -
Lal23g0938 307 PANTHER - 134 306 - -
Lal23g0938 307 PANTHER - 7 134 - -
Lal23g0938 307 Gene3D Mitochondrial carrier domain 116 307 IPR023395 -
Lal23g0938 307 Pfam Mitochondrial carrier protein 116 200 IPR018108 -
Lal23g0938 307 Pfam Mitochondrial carrier protein 221 303 IPR018108 -
Lal23g0938 307 Pfam Mitochondrial carrier protein 11 99 IPR018108 -
Lal23g0938 307 Gene3D Mitochondrial carrier domain 1 115 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0938 Lal-Chr23 11489918 11494633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0938 28 302 Antiporters AT1G79900 29.643 1.81e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0938 K15109 - jre:109020136 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0938 23 11489918 11494633 Lal23g0938 23 11489918 11494633 ECH