Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0910 ATGCTAATATCGGGAAGGATAAAGAGTAATGCTACTGACATGGGAAAGAAGGGTAGTTGGTTTGCTGCAATAAAGAGGGTTTTTACAAACCACTCCAAGGAAAAGGTAGTTAATAATTCAGATAATAGAAGTGCAAAAGAGAAGAAGAAGGGAAAACTAAGGCATGGAGAGACTAATTCTTTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTCGGGGAGTTTGAAAGAGACCAACAAATACTTACCGTTAAGCCTCCTACACCTCCCGAGCGACCTAAAACACCACCTTTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTGCTTCTCCCAGGGCTCCATCCTTGCGACCGACCTCTCCCAAAGCTGCATCTTCCCGGATTGCTCATCGCCCCAAGGAGGTTGTCTACAGACCAGAACCAACTTTAAGGAACCAACATGCCTCTGCAACTAAACTCCAAGCTGCTTTTAGAGGCTACACGGCCAGGAGGAGTTTTAGAGCTCTAAAAGGTTTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACGGTTAATGCCATGAAACACATGCAGCTGTTGGTGCGAGTTCAATCTCAGATTCAATCTCGAAGGATCCAGATGCTAGAAAACCAGGCACGATACCAAGCTGAGTTCAAGAATGATAATGCAAGTACCTTAGGCAAATTGTCTGAGGCACATGAAAACTGGGATGATAGTGTACTGACAAAAGAGGAAATAGAGGCAAGGATGCAGAGGAAGGTGGAAGCAATCCTCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGGCACTCCGAAATCAAATCAAACACCGGTGACAGACACAAAACCTGGTGGATTTCCGTGGTGGTGGAACTGGTTGGAAAGACAACTTCCAGCTGCAGCAAATCCACAAGAAAGACAAATATTGAAGAATTTCCATCTTACACCTCCTAGACCATACTCGGAACAAAAGACTAGTCCAATACCAACTTCAAACACTCCTATGCAGCATCATTTTTCCTTTGATAATATGGACACTCCAACACCAAAATCCACTAAATCAACTATAGTAACATCTTCAAAACCTGCAAGAACTCCTCCATACAGAACTCCACAAACAAACACCTCAAAATATTCAAGGCCAAGGGCTATTGGAGCACATTCACCTTTTGATGTTCCACTAAAAGATGATGAAAGTCTCACTAGCTGCCCTCCATTTTCAGTGCCAAACTTCATGGCTCCAACGGTTTCGGCTACGGCCAAAGTTCGCGCTAATAGTAATCCAAGAGAAAGGTTTGGTGGGACTCCAACCAGTGAATCATCAAAGAGGAGATCTTCATTTCCTTTGTCACAAGGAATTGGATCATTCAAATGGACTAAAGGGTCATTTTTCTCAAACAAGGATTCTAGCACTAAAAGGGTGCCAGATAAATATAAGTCACTTGAGTCTATAGGAAACATGAGTGTGGATTCAACATTGTCTGTGCCAGCAGCAATGGAAAGAAAGCCATTTACAAGATTTGTGTGA 1569 0.4353 MLISGRIKSNATDMGKKGSWFAAIKRVFTNHSKEKVVNNSDNRSAKEKKKGKLRHGETNSFIPLFREPSSIEKIFGEFERDQQILTVKPPTPPERPKTPPFVPPRAASPRAASPRAPSLRPTSPKAASSRIAHRPKEVVYRPEPTLRNQHASATKLQAAFRGYTARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDNASTLGKLSEAHENWDDSVLTKEEIEARMQRKVEAILKRERAMAFAYSHQLWKGTPKSNQTPVTDTKPGGFPWWWNWLERQLPAAANPQERQILKNFHLTPPRPYSEQKTSPIPTSNTPMQHHFSFDNMDTPTPKSTKSTIVTSSKPARTPPYRTPQTNTSKYSRPRAIGAHSPFDVPLKDDESLTSCPPFSVPNFMAPTVSATAKVRANSNPRERFGGTPTSESSKRRSSFPLSQGIGSFKWTKGSFFSNKDSSTKRVPDKYKSLESIGNMSVDSTLSVPAAMERKPFTRFV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0910 522 MobiDBLite consensus disorder prediction 329 404 - -
Lal23g0910 522 MobiDBLite consensus disorder prediction 34 56 - -
Lal23g0910 522 Gene3D - 147 201 - -
Lal23g0910 522 ProSiteProfiles IQ motif profile. 149 177 IPR000048 GO:0005515
Lal23g0910 522 Pfam IQ calmodulin-binding motif 150 170 IPR000048 GO:0005515
Lal23g0910 522 MobiDBLite consensus disorder prediction 82 139 - -
Lal23g0910 522 MobiDBLite consensus disorder prediction 435 462 - -
Lal23g0910 522 MobiDBLite consensus disorder prediction 89 107 - -
Lal23g0910 522 Pfam Protein of unknown function (DUF4005) 371 466 IPR025064 -
Lal23g0910 522 PANTHER IQ-DOMAIN 5-RELATED 14 519 - -
Lal23g0910 522 SMART iq_5 148 170 IPR000048 GO:0005515
Lal23g0910 522 MobiDBLite consensus disorder prediction 34 58 - -
Lal23g0910 522 PANTHER IQ-DOMAIN 13 14 519 - -
Lal23g0910 522 MobiDBLite consensus disorder prediction 332 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0910 Lal-Chr23 11308291 11312749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0910 14 521 IQD Protein Family AT3G59690 51.532 4.22e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0910 - - lang:109331805 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0676 15 4646060 4651033 Lal23g0910 23 11308291 11312749 LSH