Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0907 ATGATGGGACATAAAAGAAGCCCATGTTCTGTTGATCAAAACAGTTATACTATTGCATCTAAAAGGCAAAAATCTGATATCTCTATCACCAATAAGGAGAGGAAGGAGAAGCTCGGCGAACGAATTGTTGCTCTGCAGCAACTTGTTTCACCATATGGGAAGACTGATACATCTTCAGTCCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATCAACAAGTTAAGGTGCTTAGTGCCCCTTACCTCGAAAGTTCACCGAAAACCGAGATGCAGGGTATAGAGGCATGCAGCCTGAGAAGTAGAGGGTTATGTCTTGTTCCTGCCTCATTAACAATGGGAGTTGCTGATAGCAATGGTGCAGATATTTGGGCTCCCATCAAGACTACTTCACCTAAATTTGAGAAGCATGATAGCTAG 420 0.4286 MMGHKRSPCSVDQNSYTIASKRQKSDISITNKERKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHQQVKVLSAPYLESSPKTEMQGIEACSLRSRGLCLVPASLTMGVADSNGADIWAPIKTTSPKFEKHDS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0907 139 CDD bHLH_AtbHLH_like 28 79 IPR045239 -
Lal23g0907 139 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 122 - -
Lal23g0907 139 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 88 IPR036638 GO:0046983
Lal23g0907 139 Gene3D - 19 92 IPR036638 GO:0046983
Lal23g0907 139 PANTHER TRANSCRIPTION FACTOR BHLH154 1 122 - -
Lal23g0907 139 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 22 71 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0907 Lal-Chr23 11290239 11294109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0907 1 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 61.538 5.29e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0907 - - lang:109333137 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0679 15 4677253 4683676 Lal23g0907 23 11290239 11294109 LSH