Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0906 ATGGCATTAGATAACCACTCACCATCTTTGGAGATATTAGTTCGAGGACCAGAAGAATTCTCACTCTGGACTGGACCCCCCTTTGTCAATGGCCAACCTGGTGTCAAGCTAGAAAAAATTAATTGTGTGAATGCGAAATTCAGCGATGATGGATCTAGACTTATGGTGATGAAATCAAACTCGGTGATTAGTGTATATGATTGCAAAAATGCTAAAGAGATCAGGTCTTTTGAACTCCCCAATATTACATCTGCTATCCTGTCCCCTTGTGGCACTTACTTGCAAACCTTTCAAAGACCTTCCGCGCCACAAGAAAAGAATGTGACACTATGGAAAACGGAGACCGGTGATCCTGTTTATCAGCACTCCCAAAAGCACTTGACAAAAAACACTTGGCCTGCAATTCAATTCAGCTTGGATGAAGCTACTGCATGCCGATTGGCAACTAATGAAGTGCAATTTTTTGACGGTGGGGATTTCTCTAAAGGAATTATCTCCCGGTTAAGAGTTCCTGGAGTAGCTGCCGTCGAGCTTTCTAGTACACCTGGGTCTCATATAGCTGCATTTGTTCCAGAATCCAAGGGAATTCCTGCTAGTGTACAGATATTTGCATCTGGAAATGCTTCTCAAAGTCAAGCTATTGCTCGACGGAATTTTTTCCGATGTTCAACGACCCAACTTAAATGGAATCGTGGTTCAACCGGACTTCTAGTGGTGGTGCAGTCAGATGTTGATAAAACTAATCAAAGTTATTATGGAGAATCAAAATTATGCTACCTGACAATAGATGGGAAGCATGAAGGACTTGTTCCTCTTAGGAAAGAGGGGCCAGTTCATGATGCTCAGTGGTCATATTCAGGCTTGGAATTTGCTGTTGTATATGGGTTTATGCCTGCCAAAGCAACTCTGTTTGACAAGAACTGCAATCCTCTACTGGAGCTTGGAACTGGTCCATATAACACTATCCGATGGAATCCAAAAGGGAAATTTTTATGTTTGGCTGGTTTCGGTAATTTACCTGGTGATATGGTATTCTGGGATTACTTGGATAAGAAGCAGCTCACAGCAACCAAGGCCGAATGGTCCGTGACAAGTGAATGGTCTCCAGATGGGCGTTATTTCATGACAGCAACAACAGCTCCAAGGCTTCAAGTTGATAACGGGATCAAGATTTTTCACTACAATGGGTCATTGTACTTCAAGAAGATGTTTAACAAGTTGTACCAGGTCGACTGGAAACCGGAGTCACCAAGTAAGTTTGGTGACATTACAGAATTAATTATGTCTCTGGACTTGGGAAAAGTTGAAGATAAAAAACCATCAGGTCAGGGACCAAAATCAACCCAGGCTTCTAAAAAAGCCTCTTCCACAAATCCACTGGCACAAAAACCTGCTGCATATCGCCCACCACATGCTAAGACTGCAGCTGCTATTCAGGCAGAGTTGCTTGGAGAGAGCACTGGAGAATCATTGAGCAAGAATGCGTTGCGAAACAAGAAGAAGAGGGAGAAACAGCGGGAGAAAAAGGCTGGTTCTGATGCCAGTTCTTCCTGA 1554 0.4318 MALDNHSPSLEILVRGPEEFSLWTGPPFVNGQPGVKLEKINCVNAKFSDDGSRLMVMKSNSVISVYDCKNAKEIRSFELPNITSAILSPCGTYLQTFQRPSAPQEKNVTLWKTETGDPVYQHSQKHLTKNTWPAIQFSLDEATACRLATNEVQFFDGGDFSKGIISRLRVPGVAAVELSSTPGSHIAAFVPESKGIPASVQIFASGNASQSQAIARRNFFRCSTTQLKWNRGSTGLLVVVQSDVDKTNQSYYGESKLCYLTIDGKHEGLVPLRKEGPVHDAQWSYSGLEFAVVYGFMPAKATLFDKNCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYLDKKQLTATKAEWSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFNKLYQVDWKPESPSKFGDITELIMSLDLGKVEDKKPSGQGPKSTQASKKASSTNPLAQKPAAYRPPHAKTAAAIQAELLGESTGESLSKNALRNKKKREKQREKKAGSDASSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0906 517 MobiDBLite consensus disorder prediction 435 517 - -
Lal23g0906 517 Gene3D - 202 420 IPR015943 GO:0005515
Lal23g0906 517 Gene3D - 30 191 IPR015943 GO:0005515
Lal23g0906 517 SUPERFAMILY DPP6 N-terminal domain-like 41 411 - -
Lal23g0906 517 MobiDBLite consensus disorder prediction 442 462 - -
Lal23g0906 517 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 513 IPR011387 GO:0003743|GO:0006413
Lal23g0906 517 PIRSF Transl_init_eIF2A 5 517 IPR011387 GO:0003743|GO:0006413
Lal23g0906 517 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0906 Lal-Chr23 11275340 11281661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0906 87 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.528 1.43e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0906 K15026 - gmx:100811589 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0681 15 4695367 4701659 Lal23g0906 23 11275340 11281661 LSH