Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0899 ATGGTTACTTCGGTAGAGCTCGAATCCATGGCGGAAAGAGATGGTGTGGAAGATGGAAGAGAAGGCAACTACATCTTCCTCCTACACAATATGGATGCAGCAACTACATCTCATTTTCAATGTGCTATACCATCTGATAACACAGAGGATGAAGTGACTGAGAAAGATATAGTTCCTTATGTTGGCATGGAGTTTGAGACTGAAGATCATGCATATAAATTTTACAATATGTATGTTGGCTTTATTGATTTTAGCATTAGAAAAGATTGGAGGAATACAAGAAAGTTAGATAAGGACATTGTAATAGCTCGACGATTTGTTTGTTTTAAAGAAGGCTTAAAGAGAAAGAAAGATCAAGAAGAGATAAAACCTCGAAAAGATATTAGAACTGGATGTTTAGCACAAATGACTATTGGTCGAGAATCAAATGGAAAATATGTTGTTAAATCATTTGCTAATGAACATAATCATGATCTTGCAACTCCCAAAAGTAGGCATAAGTTACCATCACAAAGGAGAATTTCTACTGCTCAAGTCGCCGAAGTTGAATTGGCAAGTCGTTCTGGTATACGACAAAAATTAATTTTTTAG 591 0.3553 MVTSVELESMAERDGVEDGREGNYIFLLHNMDAATTSHFQCAIPSDNTEDEVTEKDIVPYVGMEFETEDHAYKFYNMYVGFIDFSIRKDWRNTRKLDKDIVIARRFVCFKEGLKRKKDQEEIKPRKDIRTGCLAQMTIGRESNGKYVVKSFANEHNHDLATPKSRHKLPSQRRISTAQVAEVELASRSGIRQKLIF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0899 196 PANTHER OS03G0181600 PROTEIN 31 191 - -
Lal23g0899 196 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 191 IPR031052 GO:0006355
Lal23g0899 196 Pfam FAR1 DNA-binding domain 73 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0899 Lal-Chr23 11216626 11219281 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal23g0899 FAR1 7.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0899 K17604 - qlo:115964294 178.333