Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0896 ATGGATCAAAATTCAATTTCTACGATAGACAATGATGTAGCTTTTGATCTCTCCCCTATCATAAGGGTATACAAAAATGGTCGTGTAGAAAGGCTAGAAGGTGAAGAGGTTGTTCCTCCAACACTTGTTCCAACAAACATTGTTGAGTCCAAAGATGTCATTATATCAAATAAAGAAGGCATATCTGTGAGGCTTTTCATCCCTAAAACCATTGTTTATGATTGTTCAATCCAAAAGCAAAAGCTTCCCCTTTTTGTTTACTTCCATGGTGGTGCTTTTATCATATACACACCTTTTTCACCAAACTACCATAACTATGTTAACAGTGTTGTTTCAAAGGCTAATGCTATTGGTGTGTCTGTTCATTATAGAAGGGCCCCAGAGCACCCAATTCCAATTGCTAATGAAGATTCATGGCTTGCTTTGAAATGGGTTGCTTCTCATGTTGGTGGAAATGGCCCTGATGAGTGGCTGAATCAACATGCAGATTTTGAAAATGTGTTTTTTGCTGGGGATAGTGCTGGTGCAAATCTAGCACATCATATGGGTATTCGGGTCGGGTTAGAAGGGTTACCTGGTGTGAAGCTTCAAGGGATTGTGTTGGCTAATCCTTATTTTTGGGGAGTGGATCGAATTGGGTCAGAATCAAGTCATGAATTTGCACCCAAAGTGGATATGTTATGGCGTTTTGCAAGCCCAAAAACAAGTGGTTCTGATGACCCGCTTATTAACCCGGATAAGGATCCAAATCTGGTTAAGTTAGGTTGTAAGAGGGTGCTTTTGTTCGTTGCTGAGAAGGATATTTTGAAGGATAGGGGTTTGTACTATAAGGAGTTGCTTCAAAAGAGAGGGTGGAATGGAATTGTAGATGTGATTGAAACTAAGGGAGAGGACCATGTGTTTCATATATTCAAGCCAACTTCTCTAGAAGCTTTGGTTTTGCTTAACCATGTTGTTACCTTTATGAAACGTCATTAA 978 0.3967 MDQNSISTIDNDVAFDLSPIIRVYKNGRVERLEGEEVVPPTLVPTNIVESKDVIISNKEGISVRLFIPKTIVYDCSIQKQKLPLFVYFHGGAFIIYTPFSPNYHNYVNSVVSKANAIGVSVHYRRAPEHPIPIANEDSWLALKWVASHVGGNGPDEWLNQHADFENVFFAGDSAGANLAHHMGIRVGLEGLPGVKLQGIVLANPYFWGVDRIGSESSHEFAPKVDMLWRFASPKTSGSDDPLINPDKDPNLVKLGCKRVLLFVAEKDILKDRGLYYKELLQKRGWNGIVDVIETKGEDHVFHIFKPTSLEALVLLNHVVTFMKRH 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0896 325 Pfam alpha/beta hydrolase fold 85 302 IPR013094 GO:0016787
Lal23g0896 325 Gene3D alpha/beta hydrolase 13 324 IPR029058 -
Lal23g0896 325 SUPERFAMILY alpha/beta-Hydrolases 18 325 IPR029058 -
Lal23g0896 325 PANTHER ARYLACETAMIDE DEACETYLASE 10 323 - -
Lal23g0896 325 PANTHER CXE CARBOXYLESTERASE 10 323 - -
Lal23g0896 325 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 167 179 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0896 Lal-Chr23 11205254 11206384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0896 9 323 Carbohydrate Esterase AT3G48700 46.012 9.20e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0896 - - lang:109352115 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0235 16 1414366 1415464 Lal23g0896 23 11205254 11206384 PCT
Lal23g1314 23 14046517 14047398 Lal23g0896 23 11205254 11206384 PCT