Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0883 ATGATTAATATGCAAGACTGTGGTTGCTTAAGTAAAGTTCTTGCTTCTGTTTCAAGTGTTTGGAAAGTTGGGTCAAAGATGAACTTCAATGGGGATGACATGAATGGGAAGCCACCTCCAAATGTTAATCTGATGAGGCAGTCTACAATATACTCCCTGACATTTGATGAGTTGCAGAACACTATGGGTGGGTTTGGAAAGGATTTTGGGTCAATGAACATGGATGAACTCTTGAAAAACATATGGACAGCTGAAGAGACTCAGGCTTTGGCATCTTCAGCTGCTTCGGGTGGTGGCAGTGGCGGTGGCGGAGGAGACGGTCATAACCCTGGTAACTTGCAAAGACAAGGTTCTATAACATTGCCAAGGACCCTTAGTCAGAAAAAAGTTGATGAGGTTTGGAGGGATTTGATCAAAGATGGGAGTGGCAATGTGGGTTCATCTATGCCTCAAAGCCAACCAACGTTAGGAGAAATTACTTTGGAGGAGTTTTTGGTCAGAGCTGGGGTTGTAAGAGAAGATATGCCTCAACCTCAACAAATTGGAAGACCAAATAATAATTCATGGTTTGGTGACTTGTCTAGATCAAACAATAATAATGGTGAAATGCTTCTTGGGTTTCAACAAACAAACACGAACAACGGGAATTCAAGTAACAATAGGATTCTAGAGGGCAATAACTTGGTTCCTAAACATCCTCCTCCTTTCTCATTAAACTCAAATCATTCTCAGCAACAAGCACAACAGCACCAGCACCTGCCGCCGCTTTTCCCTATACCAGCTAATGTAGCTTTTACTGCTCCTCCTCCTATGCATATGTTAAACAATTCTCTACTTACTAGCTCTGGCAAAAGAGGAGGGATAATTGGAGTTCCAGAGCATTCAATGAACGGTACATTAGTCCAAAGCAGTGTGTTACAAGGTACTGGAATGGTTGGTTTGGCCGCGGCCAATGCCATAGCCCCCGGCGCTTCTCAGGCAAGTGCAATATCACCAGATGTCATTGCAAACAATGATGTAGATAGGTCCCCACTGCTTCCGGTTCCATGTGTGATCAATAGGGGAAGGAAGTGCAGTGCTGTAGAGAAAGTTGTTGAGAGGAGACAAAGGAGAATGATCAAAAATAGAGAATCAGCTGCAAGGTCACGAGCTCGCAAGCAGGCGTACACATTCGAACTAGAGGCTGAAATTGAAAAACTTAAGGAATTGAACAAAGAATTACAGAGAAAACAGGCAGAAAATATGAAAATGCCGAAAAATCAGGATTCGGATTCCGCGTATTGTCGGGGGATAAGTAAAAGACAATGCTTGAGAAGGACACTTACAGGTCCATGGTAG 1338 0.4327 MINMQDCGCLSKVLASVSSVWKVGSKMNFNGDDMNGKPPPNVNLMRQSTIYSLTFDELQNTMGGFGKDFGSMNMDELLKNIWTAEETQALASSAASGGGSGGGGGDGHNPGNLQRQGSITLPRTLSQKKVDEVWRDLIKDGSGNVGSSMPQSQPTLGEITLEEFLVRAGVVREDMPQPQQIGRPNNNSWFGDLSRSNNNNGEMLLGFQQTNTNNGNSSNNRILEGNNLVPKHPPPFSLNSNHSQQQAQQHQHLPPLFPIPANVAFTAPPPMHMLNNSLLTSSGKRGGIIGVPEHSMNGTLVQSSVLQGTGMVGLAAANAIAPGASQASAISPDVIANNDVDRSPLLPVPCVINRGRKCSAVEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEIEKLKELNKELQRKQAENMKMPKNQDSDSAYCRGISKRQCLRRTLTGPW 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0883 445 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 370 385 IPR004827 GO:0003700|GO:0006355
Lal23g0883 445 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 445 IPR043452 GO:0003700|GO:0045893
Lal23g0883 445 SMART brlzneu 363 421 IPR004827 GO:0003700|GO:0006355
Lal23g0883 445 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 38 445 - -
Lal23g0883 445 MobiDBLite consensus disorder prediction 233 251 - -
Lal23g0883 445 Pfam bZIP transcription factor 367 416 IPR004827 GO:0003700|GO:0006355
Lal23g0883 445 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 365 410 IPR004827 GO:0003700|GO:0006355
Lal23g0883 445 MobiDBLite consensus disorder prediction 111 125 - -
Lal23g0883 445 CDD bZIP_plant_BZIP46 367 421 - -
Lal23g0883 445 MobiDBLite consensus disorder prediction 232 251 - -
Lal23g0883 445 MobiDBLite consensus disorder prediction 89 127 - -
Lal23g0883 445 Gene3D - 365 421 - -
Lal23g0883 445 Coils Coil 386 420 - -
Lal23g0883 445 SUPERFAMILY Leucine zipper domain 367 413 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0883 Lal-Chr23 11126985 11130395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0883 28 445 bZIP Transcription Factor Family AT1G49720 48.090 2.75e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal23g0883 bZIP_1 4.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0883 K14432 - gmx:100776600 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0708 15 4941367 4945085 Lal23g0883 23 11126985 11130395 LSH