Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0851 ATGGCAAGATTGAAGGTGTTGTCAGCTCTTGACACAGCAAAAACTCAATACTACCATTTCAAGGCCATAATCATTGCCGGCATGGGACTCTTCACTGATGCATATGATCTCTTCTCCATCACTCTCATCATCAAAATCATAGGAAGGATATACTACAGTGACCGCCATGGCGATAACAAATACCAGACACCGCCTGTTGTTGCGTCTGCCTTGGTGGCCATCGCGCTGTTAGGCACGGCCATTGGTCAGTTGGTGTTTGGAAGGCTTGGTGACCTCAAAGGGCGGCGCTATGTCTACGGTCTTGCCTTGATGCTCATGGTCATTGGTTCTTTGGCTTCTGGCTTCTCCATTTGTACTTCAAGAACATGCGTTCTCCTCTCTCTAGGCTTCTTCAGGTTTGTGTTAGGGCTGGGGATTGGAGGAGACTACCCTTTATCCTCAACTATAATGTCTGAGTTTGCAAACAAAAAGACTAGAGGGTCTTTCATAGCAGCTGTGTTTTGCATGCAAGGATTTGGTATATTGGCTAGTGCCATCGTCACAACGGTGGTGTGTTCAATATTCCACAGTGCTTCTAACACTTCACCTCAAAAACCAACGCCGCAAGGGGCTGACGTTGCATGGAGGCTGATACTTATGGTAGGTGCAGTTCCGGCAGCCTTGACTTATTACTGGCGGATGATGATGCCCGAAACTGCTAGGTACACAGCATTAGTGGAACAGAATGTGATGCAAGCAACAAAGGACATGGAGAAAGTTCTTGATATCTCAATAAGCGACATAGTTGAAGAAAATCCATTGCCACCAACCCAACATAAGTACCCTCTAATTTCCATGGAGTTTCTTCGTCTACATGGCCGTGATCTTTTTGCATGTTCCTCTACTTGGTTCCTCGTGGACATTGTGTTCTACAGCAGCAACCTTTTCCAGTATCAAATATACAAACACTTCCTCAAAAACAAAAACAATGTTGATGTGTATCAAGAAGCTATCAACCTTTCTAGGGTCCAAGCCATTATTGCTATATGTTCCACCATTCCTGGCTACTTCTTCTCAGTGTATTTCATTGATCGTGTGGGAAGAGTCAAAATACAGATGATGGGGTTTTTCTTCATGGGTTTGGCTTTTTTTGCTATAGGGATTCCTTATTATTCATATTGGACAAGTGCTAAAGAATATAATAAGGGTTTCATAGTCCTATATGGCCTTGCTTTCTTCTTTGCCAATTTTGGACCAAACACAACTACTTTTATAGTCCCAGCTGAACTTTTCCCAGCTAGGTTTAGATCAACATGTCATGGGATTTCTGGTGCAGCTGGGAAAGTTGGTGCAATAATTGGATCTGTAGGGTTTTTATGGGCATCACATAAAGAAAAAGAGGAAGGGTACCCTAAGGGAATTGGAATGCAAGCTTCCCTTATTATACTTGGAGGGGTGTGCATAGTGGGGATGTTGGTCACATTTTTATTCACTAGGGAAACCATGGGAAGGTCTTTGGAAGAGAATGAGATTGATCAATCTCATCAAATTGAAATTGAAGAGTTCAACCATGGTTGA 1557 0.4316 MARLKVLSALDTAKTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKIIGRIYYSDRHGDNKYQTPPVVASALVAIALLGTAIGQLVFGRLGDLKGRRYVYGLALMLMVIGSLASGFSICTSRTCVLLSLGFFRFVLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFCMQGFGILASAIVTTVVCSIFHSASNTSPQKPTPQGADVAWRLILMVGAVPAALTYYWRMMMPETARYTALVEQNVMQATKDMEKVLDISISDIVEENPLPPTQHKYPLISMEFLRLHGRDLFACSSTWFLVDIVFYSSNLFQYQIYKHFLKNKNNVDVYQEAINLSRVQAIIAICSTIPGYFFSVYFIDRVGRVKIQMMGFFFMGLAFFAIGIPYYSYWTSAKEYNKGFIVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAAGKVGAIIGSVGFLWASHKEKEEGYPKGIGMQASLIILGGVCIVGMLVTFLFTRETMGRSLEENEIDQSHQIEIEEFNHG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0851 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 495 IPR020846 GO:0022857
Lal23g0851 518 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal23g0851 518 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 505 - -
Lal23g0851 518 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 505 - -
Lal23g0851 518 Pfam Sugar (and other) transporter 24 502 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal23g0851 518 CDD MFS_PhT 23 494 - -
Lal23g0851 518 Gene3D MFS general substrate transporter like domains 18 516 IPR036259 -
Lal23g0851 518 SUPERFAMILY MFS general substrate transporter 10 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0851 Lal-Chr23 10894119 10897826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0851 1 503 Inorganic Solute Cotransporters AT1G76430 62.669 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0851 K08176 - gmx:100797683 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0782 16 5057923 5061985 Lal23g0851 23 10894119 10897826 LSH