Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0845 ATGGAACAAAGCGGTTACCGAAACAACAACAACAACAGAGGCCGTGGTAGTAACAACAACCGTGGCGGACGAGGAGACCGTGGTGGACGAGGAGAACGTGGCGGACGAGGAGACCGTGGCGGACGAGGAGGCCGTGGTGGCAGAGGAGGAGAGTTTTATCCTCCAAACCAGTCACAGATGGCTGGTGGCGGTGGTGGCGGCGGTGGCGGTGGCAGAGGAAGGGGTATTCCTCAGCAATCTCAACAATGGTCGCAAAAGCCAATCCCCTCTAACGACGGCGGAAGAGGAACTGGCTCACCAAATCCTCCCATTCGACGAACTGAATCGCCAAACCCTCCTACTAGAGGAACTGCATCATCAAATCCTCCTACTCGAGTAACTGGATCATCAAATCCTCCTACTCGAAGAACTGGATCATCAAAACCTCCTACTGTGATGCATGATCTCCCTCGTACAATTCATGCAGATATTGAACGGCTAAACATATCAGAGTCAGATAACAAATGGGAAAAGATTTCACCTGTGCATAGGCCTGACAATGGTGGCACAATAGCAATTCGGAGAACCAGGCTTCGCGTCAATCATTTTGCTGTTACCTTCAATCCACAAACTATAATTAATCACTATGATGTTGATGTGAAGCCGAAGTTGCCTCCAAGACAAGGTCGACCTCCGAAGAAGATATCGAAGTCAGAACTATCTTTGATTAGGGGCAAATTGTTTGCTGATCATCCTAAGACATTGCCTTTGAAAATGACTGGATATGATGGTGAAAAGAACATAGTGAGTGCAATACCACTGCCAGAAGAAACCTTTACTGTGGACATTTCTCATGGAGAGGATGAAAAGCCTGTTTCATATGTTGTTACTTTAACTCTTGTTAACAAACTTGAGCTTCGAAAGTTAAGGGATTACCTTAGTGGCAATGTTCTGTCAATTCCTAGGGATGTTTTATATGGAATGGATTTGGTTGTGAAGGAGAATCCAGCAAAAAACACTGTTTCTTTAGGACGATGCTTCTATCCTACAAACCCTCCATTGGTAGATAATGATCTTGGACATGGCATAATCGCAATTGGAGGGTTTCAACACAGTCTGAAACCTACATCTCAAGGTTTGGCTATGTGTTTGGACTACTCGGTTTTATCTTTCCGAAAGAAAATGTCTGTCCTGGACTTCCTAGCTGCTCACATTGATGGTTTCAATTTGGCTGAGTTTTGGAAATACAAAGAGCAGGTTGAGGAGGCGCTTATTGGATTGAAAGTCAATGTCACTCACAGGAGAACCAAACAGAAGTACACTATTGCCAAATTAACAGATAGGGAGATTCAGCATATTACTTTTCCTCTGGTGGACCTAGAGGGTCAAAACCCCCCGACGGATGTTAGTCTTGTTGCATACTTCAAAGATAAACATGGTGCGGTCATTAAGCACAAGGATATTCCTGCCTTGCAGTTTGGAGGCAACAAGATTAATTATGTACCCATGGAGTTGTGCGTCTTAGTTGAGGGTCAAAGGTTCCCGAAAGAGTATTTGGACAAGAATGCTTCTAGGACCTTGAAAGATATGTCATTGGCTCGTCCGTGGGATAGGGAATCTCTCATACAGAGGATGATAAAATCAAATGATGGACCCTGCGGGGGTGGTATTCTTCAGAACTTTGGAATGAATGTCAACACTACAATGACAAATGTCACTGGACGTGTCATTGGCCCCCCAAAGTTGAAGTTAGGTGATCCAAGTGGCAATATTATTAGCATGACGGTGGATCCAGAGAAATGTCAGTGGAATCTAATTGGAAAATCAATGGTGGAAGGGAAGTCAGTTGAATGTTGGGGCATTCTTGATTTTACCAGCCAGGGGCCAAATTGGAGCAAATTAAAAGGCAATCAATTCATTTGGAAGCTTATCGAAAAGTACAGAAAATTGGGCATTAACATGGAGGAGCCAGTTCACATTGAACTTTCTACAATGCGGAAACTTGGGGATTATGGTTCACTATGTAAGCTACTTGAAAAAATTAATGATGGCGTTTATAAAAAATGTCAGCGCCGGTTGCAATTCCTTCTTTGTGTGATGGCCCACAAAGATCCAGGTTACAAGTGGATCAAGTGGATTTCTGAGACGAAGGTTGGCATAGTGACACAATGTTGTTTGTCTGGTAATGCTAATGAAGGGAAAGATCAGTATCTTACAAATATTGCTCTGAAGATCAATGCAAAACTTGGAGGCAGTAATGTAGAGCTTAATAATAGGCTCCCACACTTTGAAGGTGAAGGTCATGTTATGTTTATCGGTGCTGATGTCAATCATCCTGGTTCTCGGGACATTGATAGTCCTTCGGTTGCTGCAGTGGTTGCCACTGTTAACTGGCCTGCTGCAAATCGCTATGCAGCACGTGTTTGTGCTCAAGAGCATAGGAAGGAGAAAATTGTGAACTTTGGAGAAATTTGCTATGAGCTTGTTGCATGTTATGATAGGTTGAACAAAGTGAGGCCTGAAAAAATTGTCATCTTTCGTGATGGGGTAAGTGAGAGCCAATTTCACATGGTTCTTACTGAAGAGCTACTAGATTTGAAGAAAGTATTTGAGCGCTCAAATTACTTCCCAACCATCACTCTCATTGTGGCACAAAAGCGACATCAGACTCGATTGTTCCCCGCAGGAAGGAACGAGGGGACATCTAGTGGCAATGTGTTCCCTGGAACAGTTGTGGACACAAAAATCATACACCCTTTTGAATTCGATTTTTACTTGTGTAGCCATTTTGGAAGCCTTGGTACAAGCAAGCCCACTCACTATCATGTCTTGTGGGATGAACACAAGTTTACTTCTGATGGATTGCAGGAACTCATATATAATATGTGCTTCACCTTTGCAAGGTGCACTAAACCTGTATCTTTAGTTCCTCCTGTGTACTATGCCGACCTTGCTGCGTATAGAGGACGTTTATACCATGAAGCAAAGATTGGGGTGCAATCTCCATCACCCATGGCTTCTTCATCACTCTCTTCGACAACCTTAATTTCAAATGGTCTAGATTCTTACAAGTTGCATGCTGATGTGCAAAATGGAATGTTCTTCATCTGA 3090 0.4346 MEQSGYRNNNNNRGRGSNNNRGGRGDRGGRGERGGRGDRGGRGGRGGRGGEFYPPNQSQMAGGGGGGGGGGRGRGIPQQSQQWSQKPIPSNDGGRGTGSPNPPIRRTESPNPPTRGTASSNPPTRVTGSSNPPTRRTGSSKPPTVMHDLPRTIHADIERLNISESDNKWEKISPVHRPDNGGTIAIRRTRLRVNHFAVTFNPQTIINHYDVDVKPKLPPRQGRPPKKISKSELSLIRGKLFADHPKTLPLKMTGYDGEKNIVSAIPLPEETFTVDISHGEDEKPVSYVVTLTLVNKLELRKLRDYLSGNVLSIPRDVLYGMDLVVKENPAKNTVSLGRCFYPTNPPLVDNDLGHGIIAIGGFQHSLKPTSQGLAMCLDYSVLSFRKKMSVLDFLAAHIDGFNLAEFWKYKEQVEEALIGLKVNVTHRRTKQKYTIAKLTDREIQHITFPLVDLEGQNPPTDVSLVAYFKDKHGAVIKHKDIPALQFGGNKINYVPMELCVLVEGQRFPKEYLDKNASRTLKDMSLARPWDRESLIQRMIKSNDGPCGGGILQNFGMNVNTTMTNVTGRVIGPPKLKLGDPSGNIISMTVDPEKCQWNLIGKSMVEGKSVECWGILDFTSQGPNWSKLKGNQFIWKLIEKYRKLGINMEEPVHIELSTMRKLGDYGSLCKLLEKINDGVYKKCQRRLQFLLCVMAHKDPGYKWIKWISETKVGIVTQCCLSGNANEGKDQYLTNIALKINAKLGGSNVELNNRLPHFEGEGHVMFIGADVNHPGSRDIDSPSVAAVVATVNWPAANRYAARVCAQEHRKEKIVNFGEICYELVACYDRLNKVRPEKIVIFRDGVSESQFHMVLTEELLDLKKVFERSNYFPTITLIVAQKRHQTRLFPAGRNEGTSSGNVFPGTVVDTKIIHPFEFDFYLCSHFGSLGTSKPTHYHVLWDEHKFTSDGLQELIYNMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEAKIGVQSPSPMASSSLSSTTLISNGLDSYKLHADVQNGMFFI 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0845 1029 Gene3D - 758 1029 IPR036397 GO:0003676
Lal23g0845 1029 SMART DUF1785_2 334 387 IPR014811 -
Lal23g0845 1029 CDD Piwi_ago-like 550 985 IPR045246 -
Lal23g0845 1029 Pfam Piwi domain 689 983 IPR003165 GO:0003676
Lal23g0845 1029 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 142 1028 - -
Lal23g0845 1029 SMART Piwi_a_2 688 986 IPR003165 GO:0003676
Lal23g0845 1029 Gene3D paz domain 383 507 - -
Lal23g0845 1029 ProSiteProfiles Piwi domain profile. 688 987 IPR003165 GO:0003676
Lal23g0845 1029 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 142 1028 - -
Lal23g0845 1029 Pfam Argonaute linker 1 domain 336 386 IPR014811 -
Lal23g0845 1029 Gene3D - 569 751 - -
Lal23g0845 1029 ProSiteProfiles PAZ domain profile. 413 503 IPR003100 GO:0005515
Lal23g0845 1029 MobiDBLite consensus disorder prediction 1 19 - -
Lal23g0845 1029 MobiDBLite consensus disorder prediction 110 141 - -
Lal23g0845 1029 SUPERFAMILY Ribonuclease H-like 682 987 IPR012337 -
Lal23g0845 1029 MobiDBLite consensus disorder prediction 25 45 - -
Lal23g0845 1029 SUPERFAMILY PAZ domain 384 542 IPR036085 GO:0005515
Lal23g0845 1029 MobiDBLite consensus disorder prediction 1 150 - -
Lal23g0845 1029 CDD PAZ_argonaute_like 388 502 - -
Lal23g0845 1029 Pfam N-terminal domain of argonaute 187 324 IPR032474 -
Lal23g0845 1029 Pfam PAZ domain 408 519 IPR003100 GO:0005515
Lal23g0845 1029 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0845 Lal-Chr23 10850362 10856473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0845 130 1004 Eukaryotic Initiation Factors Gene Family AT1G48410 34.549 2.56e-150 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0845 K11593 - gmx:100805250 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0845 23 10850362 10856473 Lal23g0845 23 10850362 10856473 ECH