Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal23g0840 | ATGGACGAGGACCAAGAGATGGAGAGGTTTGGAATGGACAATGATTTTGTAGGTGGAGAATGGATTGGTGGTGAGTATTACTATCGAAAGCGCAAAGAAAAACGTACTCAAACCAGAGAAGACGTTCTTTATGGAGTTTTTGCAGACTCGGAGGATGATGATGACGATTACTCTAGCAGAAAACGCAGAAAAGACCGTGGCTTATCTAAAAAGCAAGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGCACTTTCATGCCTAATCAAGATACTGATAAGGATTCTAAAGAACAGGATGAAAAGGATAATTATATTAGTGAAGATAGGCCGGGTTTAGGTCTTGGTATGGGGTCTGGTAGCACTTCTGGATCTGGTTTAGGTTTTAATTCCAGTTATACTGCTAATGGCTCTGATAAGAATAATGAGTTTAATGAGAATGATGATGATAACTTTCTGCCTACGGTGCCTACTGCATTTGGAAAGAAGATTAAGGAGGGGGCGATGAGAAGGGAAAAGGAAAGGGAGAGAGAAAAATTGCAGAAGAAGAGGGGTCAACATCAAAGTCAAGGTCAAGATGTTGATGTTGGGAAATTTGAGAAGCATACGAAGGGTATAGGGATGAAGCTATTGGAGAAGATGGGTTATAAAGGTGGTGGTCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCCATTGAGGCGAGATTGAGGGCCAAGAATACCGGTATTGGATTTAATGACTCTAAGGGGACTATGCCATTGCCTGCTTTGCAGGTAGAGAAGAATATCTCATCGGCAGCCACCCAATCTATTGCTGGCCCAACTAAAAAAAGGTCATGGTCAAAGCAAGCAAGTTCAAAGAAGAAAGAGGATGAAAGCTATATTACTGCACAGGAGTTATTAGCAAGCAAGCAAGAACAGGATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGACCACTGGTTCGAGTAATTACAAATATGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAAAATGATATCCCAATGCCAGAACTTCAGCATAATGTGGGGTTAATAGTTCGGTTGGCCGAGGCTGACATCCAAGAGATTGATAGAAAATTGAGGAGGGAGAGGGAGACAGCACTTAGCTTGAAACAAGACAAAGAGAAGTTAGAAACTGAGGCAGCATTTAAAAAGAAGCAAGTAGATAGTATGGAGGAAATAGAGGGTGTGTTGGACCGGGTGGAAAAAGAGAACAGTTTAGGAATATTAACATTGGATTCCCTTGCTCAAAGCTTCAATGAGTTGCATAAAAGATATGCTGATAACTACAAGTTATGTAACTTGTCATGGATTGCTGGCTCATATGCTTTGCCTTTTTTTATCAGAGTTTTTCAACAATGGGATCCTCTTCAAAATCCATATCACGGGATGGATTTGGTATCATCTTGGAAGACATTGCTACAAGAAGATTGCCTTGATATTTGGGATGTATCGACGCCTTATACCCAATTGGTTTCTGAGGTTGTATTACCAGCTGTTAGAATATCTGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTGCGGTTTCTAGAGTCATGGGAAAAGTTGCTTCCTTCTTCTGTTATCACTACGATATTGGACGAAATAGTCATGCCAAAATTGTCAAGTGCTGTAGATGCTTGGGAACCCCACCGTGAAACCATTCCCATTCATACATGGGTGCACCCATGGCTACCTCTGCTAGGACACAAGCTGGAGGGTGTGTACCAGGGGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCCTATGCTATATTGTCTCCTTGGAAGACTGTCTTTGATTCTGCAAGCTGGGAACAGCTCATGCTTCGTTTTATTGTGCCAAAGTTGCAGCTTGTTTTGCAAGAGTTCCAAGTGAACCCAGCAAATCAGAATCTTGATCAATTTTATTGGGTAATGAACTGGGCTTCTGCTATTCCAATTCACCTGATGGTTGATATGATGGATAAATTTTTCTTCGCCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAGTCCTAATTTTGAGGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGAGCTTTTGGCAAATGAAAGTATTCGGTATCAGCTTAACCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGCAGGTGGTTCAACCTGGTTTGAAAGAGAATATCAGCTATCTCAGGGTACTTGAGCAAAGGCAATTTGAAGCACAGCAGAAAGCAGCAGCCTATGCTCAACACCAGGTTGCTGCAAGCTTGGGCAGTGCTGTCAATGCTGATGGTATGCAATCACATGAGTTGACCTTGAAAGAAGTTATCGAGGCCCATGCCCAGCAACATGGCCTGCTATTCAAGCTTAAACCTGGAAGAATGCACAACGGTCACCAAATATATGGGTTTGGTAATATCAGCATTGTAATAGACTCTCTAAATCAAAAGGTATATGCCCAAAATGAGGACACATGGTCTTTGGAATCTCTCGAAGGCTTGCTAGAGTTGCACAATAAATCTCTTAAAAACATGCTTGATCAAGCATTTCGAGCCAGGAATCTAGTTAGTAGGGAGCAACCTCAATAG | 2658 | 0.421 | MDEDQEMERFGMDNDFVGGEWIGGEYYYRKRKEKRTQTREDVLYGVFADSEDDDDDYSSRKRRKDRGLSKKQDLTKPVNFVSTGTFMPNQDTDKDSKEQDEKDNYISEDRPGLGLGMGSGSTSGSGLGFNSSYTANGSDKNNEFNENDDDNFLPTVPTAFGKKIKEGAMRREKEREREKLQKKRGQHQSQGQDVDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEARLRAKNTGIGFNDSKGTMPLPALQVEKNISSAATQSIAGPTKKRSWSKQASSKKKEDESYITAQELLASKQEQDLEVVQKVYDMRGPLVRVITNMSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRKLRRERETALSLKQDKEKLETEAAFKKKQVDSMEEIEGVLDRVEKENSLGILTLDSLAQSFNELHKRYADNYKLCNLSWIAGSYALPFFIRVFQQWDPLQNPYHGMDLVSSWKTLLQEDCLDIWDVSTPYTQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVITTILDEIVMPKLSSAVDAWEPHRETIPIHTWVHPWLPLLGHKLEGVYQGIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPANQNLDQFYWVMNWASAIPIHLMVDMMDKFFFAKWLQVLYHWLCSSPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMQVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQHQVAASLGSAVNADGMQSHELTLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNISIVIDSLNQKVYAQNEDTWSLESLEGLLELHNKSLKNMLDQAFRARNLVSREQPQ | 885 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 33 | 195 | - | - | |
Lal23g0840 | 885 | Coils | Coil | 356 | 414 | - | - | |
Lal23g0840 | 885 | Pfam | GC-rich sequence DNA-binding factor-like protein | 422 | 688 | IPR022783 | - | |
Lal23g0840 | 885 | Coils | Coil | 170 | 190 | - | - | |
Lal23g0840 | 885 | Pfam | G-patch domain | 203 | 244 | IPR000467 | GO:0003676 | |
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 164 | 195 | - | - | |
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 54 | 72 | - | - | |
Lal23g0840 | 885 | ProSiteProfiles | G-patch domain profile. | 203 | 248 | IPR000467 | GO:0003676 | |
Lal23g0840 | 885 | SMART | G-patch_5 | 201 | 246 | IPR000467 | GO:0003676 | |
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 118 | 141 | - | - | |
Lal23g0840 | 885 | Coils | Coil | 851 | 871 | - | - | |
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 91 | 108 | - | - | |
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 75 | 90 | - | - | |
Lal23g0840 | 885 | PANTHER | TUFTELIN-INTERACTING PROTEIN 11 | 7 | 856 | - | - | |
Lal23g0840 | 885 | PANTHER | TUFTELIN-INTERACTING PROTEIN 11-RELATED | 7 | 856 | IPR045211 | GO:0000390 | |
Lal23g0840 | 885 | MobiDBLite | consensus disorder prediction | 267 | 292 | - | - | |
Lal23g0840 | 885 | PIRSF | TFIP11 | 1 | 864 | IPR024933 | - | |
Lal23g0840 | 885 | Pfam | Tuftelin interacting protein N terminal | 4 | 103 | IPR022159 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal23g0840 | Lal-Chr23 | 10802680 | 10806579 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal23g0840 | 206 | 244 | C2H2 Transcription Factor Family | AT5G26610 | 53.846 | 2.64e-07 | 51.6 |