Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0840 ATGGACGAGGACCAAGAGATGGAGAGGTTTGGAATGGACAATGATTTTGTAGGTGGAGAATGGATTGGTGGTGAGTATTACTATCGAAAGCGCAAAGAAAAACGTACTCAAACCAGAGAAGACGTTCTTTATGGAGTTTTTGCAGACTCGGAGGATGATGATGACGATTACTCTAGCAGAAAACGCAGAAAAGACCGTGGCTTATCTAAAAAGCAAGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGCACTTTCATGCCTAATCAAGATACTGATAAGGATTCTAAAGAACAGGATGAAAAGGATAATTATATTAGTGAAGATAGGCCGGGTTTAGGTCTTGGTATGGGGTCTGGTAGCACTTCTGGATCTGGTTTAGGTTTTAATTCCAGTTATACTGCTAATGGCTCTGATAAGAATAATGAGTTTAATGAGAATGATGATGATAACTTTCTGCCTACGGTGCCTACTGCATTTGGAAAGAAGATTAAGGAGGGGGCGATGAGAAGGGAAAAGGAAAGGGAGAGAGAAAAATTGCAGAAGAAGAGGGGTCAACATCAAAGTCAAGGTCAAGATGTTGATGTTGGGAAATTTGAGAAGCATACGAAGGGTATAGGGATGAAGCTATTGGAGAAGATGGGTTATAAAGGTGGTGGTCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCCATTGAGGCGAGATTGAGGGCCAAGAATACCGGTATTGGATTTAATGACTCTAAGGGGACTATGCCATTGCCTGCTTTGCAGGTAGAGAAGAATATCTCATCGGCAGCCACCCAATCTATTGCTGGCCCAACTAAAAAAAGGTCATGGTCAAAGCAAGCAAGTTCAAAGAAGAAAGAGGATGAAAGCTATATTACTGCACAGGAGTTATTAGCAAGCAAGCAAGAACAGGATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGACCACTGGTTCGAGTAATTACAAATATGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAAAATGATATCCCAATGCCAGAACTTCAGCATAATGTGGGGTTAATAGTTCGGTTGGCCGAGGCTGACATCCAAGAGATTGATAGAAAATTGAGGAGGGAGAGGGAGACAGCACTTAGCTTGAAACAAGACAAAGAGAAGTTAGAAACTGAGGCAGCATTTAAAAAGAAGCAAGTAGATAGTATGGAGGAAATAGAGGGTGTGTTGGACCGGGTGGAAAAAGAGAACAGTTTAGGAATATTAACATTGGATTCCCTTGCTCAAAGCTTCAATGAGTTGCATAAAAGATATGCTGATAACTACAAGTTATGTAACTTGTCATGGATTGCTGGCTCATATGCTTTGCCTTTTTTTATCAGAGTTTTTCAACAATGGGATCCTCTTCAAAATCCATATCACGGGATGGATTTGGTATCATCTTGGAAGACATTGCTACAAGAAGATTGCCTTGATATTTGGGATGTATCGACGCCTTATACCCAATTGGTTTCTGAGGTTGTATTACCAGCTGTTAGAATATCTGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTGCGGTTTCTAGAGTCATGGGAAAAGTTGCTTCCTTCTTCTGTTATCACTACGATATTGGACGAAATAGTCATGCCAAAATTGTCAAGTGCTGTAGATGCTTGGGAACCCCACCGTGAAACCATTCCCATTCATACATGGGTGCACCCATGGCTACCTCTGCTAGGACACAAGCTGGAGGGTGTGTACCAGGGGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGTGATGGTTCTGCCTATGCTATATTGTCTCCTTGGAAGACTGTCTTTGATTCTGCAAGCTGGGAACAGCTCATGCTTCGTTTTATTGTGCCAAAGTTGCAGCTTGTTTTGCAAGAGTTCCAAGTGAACCCAGCAAATCAGAATCTTGATCAATTTTATTGGGTAATGAACTGGGCTTCTGCTATTCCAATTCACCTGATGGTTGATATGATGGATAAATTTTTCTTCGCCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAGTCCTAATTTTGAGGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGAGCTTTTGGCAAATGAAAGTATTCGGTATCAGCTTAACCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGCAGGTGGTTCAACCTGGTTTGAAAGAGAATATCAGCTATCTCAGGGTACTTGAGCAAAGGCAATTTGAAGCACAGCAGAAAGCAGCAGCCTATGCTCAACACCAGGTTGCTGCAAGCTTGGGCAGTGCTGTCAATGCTGATGGTATGCAATCACATGAGTTGACCTTGAAAGAAGTTATCGAGGCCCATGCCCAGCAACATGGCCTGCTATTCAAGCTTAAACCTGGAAGAATGCACAACGGTCACCAAATATATGGGTTTGGTAATATCAGCATTGTAATAGACTCTCTAAATCAAAAGGTATATGCCCAAAATGAGGACACATGGTCTTTGGAATCTCTCGAAGGCTTGCTAGAGTTGCACAATAAATCTCTTAAAAACATGCTTGATCAAGCATTTCGAGCCAGGAATCTAGTTAGTAGGGAGCAACCTCAATAG 2658 0.421 MDEDQEMERFGMDNDFVGGEWIGGEYYYRKRKEKRTQTREDVLYGVFADSEDDDDDYSSRKRRKDRGLSKKQDLTKPVNFVSTGTFMPNQDTDKDSKEQDEKDNYISEDRPGLGLGMGSGSTSGSGLGFNSSYTANGSDKNNEFNENDDDNFLPTVPTAFGKKIKEGAMRREKEREREKLQKKRGQHQSQGQDVDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEARLRAKNTGIGFNDSKGTMPLPALQVEKNISSAATQSIAGPTKKRSWSKQASSKKKEDESYITAQELLASKQEQDLEVVQKVYDMRGPLVRVITNMSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRKLRRERETALSLKQDKEKLETEAAFKKKQVDSMEEIEGVLDRVEKENSLGILTLDSLAQSFNELHKRYADNYKLCNLSWIAGSYALPFFIRVFQQWDPLQNPYHGMDLVSSWKTLLQEDCLDIWDVSTPYTQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVITTILDEIVMPKLSSAVDAWEPHRETIPIHTWVHPWLPLLGHKLEGVYQGIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPANQNLDQFYWVMNWASAIPIHLMVDMMDKFFFAKWLQVLYHWLCSSPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMQVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQHQVAASLGSAVNADGMQSHELTLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNISIVIDSLNQKVYAQNEDTWSLESLEGLLELHNKSLKNMLDQAFRARNLVSREQPQ 885
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0840 885 MobiDBLite consensus disorder prediction 33 195 - -
Lal23g0840 885 Coils Coil 356 414 - -
Lal23g0840 885 Pfam GC-rich sequence DNA-binding factor-like protein 422 688 IPR022783 -
Lal23g0840 885 Coils Coil 170 190 - -
Lal23g0840 885 Pfam G-patch domain 203 244 IPR000467 GO:0003676
Lal23g0840 885 MobiDBLite consensus disorder prediction 164 195 - -
Lal23g0840 885 MobiDBLite consensus disorder prediction 54 72 - -
Lal23g0840 885 ProSiteProfiles G-patch domain profile. 203 248 IPR000467 GO:0003676
Lal23g0840 885 SMART G-patch_5 201 246 IPR000467 GO:0003676
Lal23g0840 885 MobiDBLite consensus disorder prediction 118 141 - -
Lal23g0840 885 Coils Coil 851 871 - -
Lal23g0840 885 MobiDBLite consensus disorder prediction 91 108 - -
Lal23g0840 885 MobiDBLite consensus disorder prediction 75 90 - -
Lal23g0840 885 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 856 - -
Lal23g0840 885 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 856 IPR045211 GO:0000390
Lal23g0840 885 MobiDBLite consensus disorder prediction 267 292 - -
Lal23g0840 885 PIRSF TFIP11 1 864 IPR024933 -
Lal23g0840 885 Pfam Tuftelin interacting protein N terminal 4 103 IPR022159 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal23g0840 Lal-Chr23 10802680 10806579 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0840 206 244 C2H2 Transcription Factor Family AT5G26610 53.846 2.64e-07 51.6