Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0839 ATGAAAGAGAGTGGTAAGAAGGAAGGTGCAGCCTCATCATCATCACCTTGTGCTGCATGCAGGCTTCTCAAGAGAAAGTGTAATCATGATTGTGTTTTTGCTCCTTATTTCCCAGCTAGTGAACCACACAAGTTTTCAAATGTGCACAAGGTTTTTGGTGCAAGTAATGTCAACAAGATGCTACAGGTTCACTATGCTCTTGTCCAACTTCCGTTGTGA 219 0.4247 MKESGKKEGAASSSSPCAACRLLKRKCNHDCVFAPYFPASEPHKFSNVHKVFGASNVNKMLQVHYALVQLPL 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0839 72 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 63 - -
Lal23g0839 72 ProSiteProfiles LOB domain profile. 15 72 IPR004883 -
Lal23g0839 72 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 63 - -
Lal23g0839 72 Pfam Lateral organ boundaries (LOB) domain 16 62 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0839 Lal-Chr23 10801728 10801946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0839 1 62 AS2 family AT1G31320 74.194 7.29e-30 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal23g0839 LOB 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0839 - - csin:114265865 103.219