Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0835 ATGGCAGATAGAGTCACTATTGGAGACTCATCATGGGATAGAAAACTGAAGAGAAAGATTGATGAGTCATTTATCATGGACAAAGATTCAAATTTGTTACTCTCTCTAAGTCTTGGTAGGAGCAACAAGGTCCAAGAATCATCATCAAATGTCAAGGCACATGAGAATTCGGATTTTGATCCAAAACGTGTTGAAAACTCGAACAACAAGGGAGTGCTGATGAAACCTAAGGAGCATGAATTTTCATGCAAGTTTTGCGACAAGAAATTTCACAACTTTCAAGCCCTAGGAGGACACCAAAACGCTCATAGACGTGAAAGAATCCTTTCGAGGATGAACAAAGAAATTGCTATGGGAACTTTTGGACTCGGCGCTTACCCGTATCCTTGCTCGCCCATGGAAAATCTTCATCCTTTTTGCGGTTCGCAATGTTATCATATGAACCCTATGGCTCACATGTCTCCTATGCATTGGAGTCATTCAAGACCTGGTTATGGAAACCAAGGGTTGTATAACACACCCTTTTCTGGTCACCAATTTGGGATAACTTCTGATTCTAGTGCAACAAATGCTCAAACTCCACACAAGTTAAATCACATTGATGTGGCCTTTGGTTGTGAACCTTATCAACCCTCTTCACTTAAAGAGAATAATGTAGTTAATAAATCTGCTACTCCTCATAATGATCTTGAAGGCCATGCAAAAAATCAGTATACTAGGAACTAA 726 0.3981 MADRVTIGDSSWDRKLKRKIDESFIMDKDSNLLLSLSLGRSNKVQESSSNVKAHENSDFDPKRVENSNNKGVLMKPKEHEFSCKFCDKKFHNFQALGGHQNAHRRERILSRMNKEIAMGTFGLGAYPYPCSPMENLHPFCGSQCYHMNPMAHMSPMHWSHSRPGYGNQGLYNTPFSGHQFGITSDSSATNAQTPHKLNHIDVAFGCEPYQPSSLKENNVVNKSATPHNDLEGHAKNQYTRN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0835 241 MobiDBLite consensus disorder prediction 215 241 - -
Lal23g0835 241 PANTHER ZINC FINGER PROTEIN JAGGED 1 241 IPR045320 GO:0003700
Lal23g0835 241 SUPERFAMILY beta-beta-alpha zinc fingers 78 108 IPR036236 -
Lal23g0835 241 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Lal23g0835 241 MobiDBLite consensus disorder prediction 44 69 - -
Lal23g0835 241 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Lal23g0835 241 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0835 Lal-Chr23 10779654 10780379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0835 81 141 C2H2 Transcription Factor Family AT5G25160 45.902 2.25e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0835 - - lang:109350422 241.891