Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0828 ATGGCTCTTTGGGTGTTTTCTGTGCTGTTTTTATTGACCCTCCTAGTCCATTCAAGTGCTCTTTACTGCATATGCCAAGATGGTGTAGGTACTCAAGCCCTTCAGAAAGCAATAGATTATGCATGTGGAAATGGTGCTGATTGTACCTCTATTCAACAAAATGGACCTTGTTACCTACCCAACACTGTGAAGGATCACTGTAACTATGCTGTTAATAGCTATTATCAGATGGAAGTTAGTTCTGGAGGGACTTGTTACTTTTCTGGTGTTGCCACAATCTCTTCAACTCCACCTTCAAATGCAAGTTCTGGATGTGTTTACCCTTCAAGTTCTAGCAATGGTACTACAGGCACATTACCTTCTCTTACACCACCAACTGGCACTGGCACTGGCACTGGCACTGGCACTGGCACACCAGAAAGTCCTAATGAGTTTGGAACAAATCCATCATCTTCAACTATCAATGGAGCTGTAGTGATGGCTTTGGAAAGTGCCTACACTAAGTTACTATTGCCCCTTCTTCTAACTACTGCATGGTTACCATTATGGGTCTAA 555 0.4288 MALWVFSVLFLLTLLVHSSALYCICQDGVGTQALQKAIDYACGNGADCTSIQQNGPCYLPNTVKDHCNYAVNSYYQMEVSSGGTCYFSGVATISSTPPSNASSGCVYPSSSSNGTTGTLPSLTPPTGTGTGTGTGTGTPESPNEFGTNPSSSTINGAVVMALESAYTKLLLPLLLTTAWLPLWV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0828 184 MobiDBLite consensus disorder prediction 112 150 - -
Lal23g0828 184 SMART X8_cls 21 107 IPR012946 -
Lal23g0828 184 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 166 - -
Lal23g0828 184 Pfam X8 domain 22 92 IPR012946 -
Lal23g0828 184 Gene3D - 15 117 - -
Lal23g0828 184 PANTHER BETA-1,3 GLUCANASE 1 166 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0828 Lal-Chr23 10734683 10736211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0828 22 130 Glycoside Hydrolase AT1G66250 40.909 1.17e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0828 - - lang:109349527 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0828 23 10734683 10736211 Lal23g0828 23 10734683 10736211 ECH
Lal16g0803 16 5197805 5198999 Lal23g0828 23 10734683 10736211 LSH
Lal15g0773 15 5530488 5531900 Lal23g0828 23 10734683 10736211 LSH
Lal23g0828 23 10734683 10736211 Lal6g0797 6 5356527 5358825 PCT
Lal23g0828 23 10734683 10736211 Lal18g0916 18 11970065 11972127 PCT
Lal6g0797 6 5356527 5358825 Lal23g0828 23 10734683 10736211 PCT
Lal18g0916 18 11970065 11972127 Lal23g0828 23 10734683 10736211 PCT