Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0807 ATGGGTAGGTCACCTTGTTGTGAGAAAGTAGGGTTAAAGAAAGGGCCATGGACTACTGAGGAAGACCAAAAGCTCAGGGCTTATATTGAAGAATATGGCCATGGAAGTTGGCGTGCTTTACCTGCCAAAGCTGGACTTCAAAGATGTGGAAAGAGTTGTAGGCTGAGGTGGACTAACTACCTGAGACCTGATATAAAGAGAGGAAAGTTCAGCTTGCAGGAAGAGCAAACCATTATTCAACTCCATGCCCTTCTTGGGAACAGATGGTCAGCAATAGCAGCTCAACTGCCTAAGAGAACAGACAACGAGATCAAGAACTATTGGAATACACACCTTAAGAAAAGGCTAACCAAAATGGGAATAGACCCAACTACCCACAAGCCAAAAATTGATGCCTTTGGTGGCTCTGGTGATTGTCGATCAAAGGACGCAGCCAACCTCAACCACATGGCTCAATGGGAGAACGCTCGTCTCGAAGCAGAAACAAGATTAGTTAGAGAGTCGAAATTACAACTCGGGTCATGCTCCAATACACAGCCTACACGTCTTATCCTCAACAAAATCACAGCTCAACCATCACTGCCGCCATGCCTTGACGTTCTCAAGGCATGGCAAAGTTCATGGTCGAAGCCACAACAACAAATAACATCACCAACAACCAAAGGAAACAATGACAACAAGATGTATCAACATAGCATGTATGGTATGATGCTCACCACCAATCATGATAATCTCGAATCTCCAACTTCCACGTTGAATTTCCCTGGAACCATGCTTCCAATCTCCACCACCACCGCTGCAATACTCAATGCAAATCTACTTCCCCTAACCACCACTAATGCTAATAACACCACCACAAATATGGAGGGTGAGTCATGGAGGCATTTAAATTTAACAAAGCAGAATAACAACCACCCTGACGAAGAGTTACTAAATGAAAAGAGAACAATAATGGAAAACAATACAATGTCAAGTTTGCAAGATGAGGATATCATGATGGCTGTGGAAGCATTTAGAACTTCTTCAGTGTACGATAACATTGTTGTTCCACCCGTACTCTTTACAACTATGGAAGAACTGAGTAGTAATGATGCAATGGTTTATGATTCCAATAACTTAGGAGCTGAACATGGAGAGAACTTGGCAATCATGAATGGTGATGGAAGCATCTATAACGTGAACCTCGAGGAAAATAACAATAAGCATTACTGGAATAGCATACTTAACTTGGTGAATGATTCACTGTCTGGTTCATCTGTATTCTGA 1266 0.4242 MGRSPCCEKVGLKKGPWTTEEDQKLRAYIEEYGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPKRTDNEIKNYWNTHLKKRLTKMGIDPTTHKPKIDAFGGSGDCRSKDAANLNHMAQWENARLEAETRLVRESKLQLGSCSNTQPTRLILNKITAQPSLPPCLDVLKAWQSSWSKPQQQITSPTTKGNNDNKMYQHSMYGMMLTTNHDNLESPTSTLNFPGTMLPISTTTAAILNANLLPLTTTNANNTTTNMEGESWRHLNLTKQNNNHPDEELLNEKRTIMENNTMSSLQDEDIMMAVEAFRTSSVYDNIVVPPVLFTTMEELSSNDAMVYDSNNLGAEHGENLAIMNGDGSIYNVNLEENNNKHYWNSILNLVNDSLSGSSVF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0807 421 CDD SANT 69 112 IPR001005 -
Lal23g0807 421 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 414 - -
Lal23g0807 421 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lal23g0807 421 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lal23g0807 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lal23g0807 421 CDD SANT 16 61 IPR001005 -
Lal23g0807 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lal23g0807 421 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lal23g0807 421 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lal23g0807 421 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 414 - -
Lal23g0807 421 SMART sant 13 63 IPR001005 -
Lal23g0807 421 SMART sant 66 114 IPR001005 -
Lal23g0807 421 Gene3D - 13 66 - -
Lal23g0807 421 Gene3D - 69 116 - -
Lal23g0807 421 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0807 Lal-Chr23 10596432 10599092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0807 1 259 MYB Transcription Factor Family AT3G01140 62.692 3.65e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal23g0807 Myb_DNA-binding 3.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0807 K09422 - gmx:100809025 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0807 23 10596432 10599092 Lal23g0807 23 10596432 10599092 ECH
Lal15g0794 15 5759373 5762152 Lal23g0807 23 10596432 10599092 LSH