LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal23g0798	ATGATGTTATCCCAGCCTTTCGATCTAGTCTCAAACCGTAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGCTCATTGAAAATGGTGCAACGTCTCACATATCGAAAGCGTCACAGCTATGCCACCAAGTCCAATCAACACAGGGTTGTTAAAACCCCTGGTGGGAAGCTCGTTTACCAAACCACTAAGAAGAGGGCTAGCGGTCCTAAATGCCCTGTAACTGGAAAGAGGATCCAGGGTATTCCACATTTAAGGCCTGCAGAATACAAGAGGTCCAGACTTTCCCGAAACCGGAGGACTGTGAATCGTGCTTATGGTGGAGTTTTGTCCGGAGGTGCTGTTAGGGAAAGGATAATTCGAGCCTTTTTGGTTGAAGAACAAAAGATTGTGAAAAAGGTATTGAAGATTCAAAAGGCAAAAGAAAAGCAAGCTTCAAAAGCCTGA	447	0.4497	MMLSQPFDLVSNRNRERERERERDCSLKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKA	148

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal23g0798	148	MobiDBLite	consensus disorder prediction	1	25	-	-
	Lal23g0798	148	MobiDBLite	consensus disorder prediction	11	25	-	-
	Lal23g0798	148	Gene3D	-	29	65	-	-
	Lal23g0798	148	PANTHER	60S RIBOSOMAL PROTEIN L34	29	148	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Lal23g0798	148	Gene3D	-	67	148	-	-
	Lal23g0798	148	PANTHER	-	29	148	-	-
	Lal23g0798	148	Pfam	Ribosomal protein L34e	29	124	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Lal23g0798	148	ProSitePatterns	Ribosomal protein L34e signature.	43	56	IPR018065	-
	Lal23g0798	148	PRINTS	Ribosomal protein L34 signature	41	54	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Lal23g0798	148	PRINTS	Ribosomal protein L34 signature	54	71	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Lal23g0798	148	PRINTS	Ribosomal protein L34 signature	72	82	IPR008195	GO:0003735\|GO:0005840\|GO:0006412
	Lal23g0798	148	PRINTS	Ribosomal protein L34 signature	94	116	IPR008195	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal23g0798	Lal-Chr23	10479901	10482052	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal23g0798	29	147	Cytoplasmic Ribosomal Protein Gene Family	AT1G69620	92.437	1.07e-76	222

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal23g0798	K02915		-	zju:107405510	217.238

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal23g0798	23	10479901	10482052	Lal23g0798	23	10479901	10482052	ECH
	Lal16g0833	16	5386201	5388387	Lal23g0798	23	10479901	10482052	LSH
	Lal15g0805	15	5859682	5862241	Lal23g0798	23	10479901	10482052	LSH