Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0785 ATGCAACTCCTCCTATTACCTCTACTCCTCCATTTCCTCCACCACTTCCACAACCCCACCACCGCACACACCCTCTCCGAACACCATTCCCTCCTCTCTTTCAAATCCACTTCCATCACCTCCGACCCGACCCATTTCCTCTCCTCATGGACCCCAAATACCCATTACTGCACCTGGCCAGGCATAACCTGCGACTCCTCGAACCACCATGTCACCACTTTAAACCTCACCTCTCTCTCCCTCTCCGGCACTCTCACCACCCTTCACCTCCCTTTTCTCTCCACTCTCTCGCTCGCCGATAACATGTTTTCAGGCCCAGTCCCTCTCTCTCTCTCTTCTCTCAACTTCCTCATACACCTTAACCTCTCCAATAACAACTTTAACTCTACTTTCCCTCCTCAACTATCTAACCTTCAAAATCTTCAAGTTCTTGACTTTTACAACAATAATATGACTGGCCCACTTCCTGTTTCGGTAACCAACATGACCAGTTTGAAGCATTTGCACCTTGGTGGTAATTTCTTCTCCGGTCAGATCCCGCCGGAGTATGGAAATTGGCGAAAAATTGAATATTTGGCTGTCTCCGGCAATGAGCTTGCCGGAACTATACCGCCGGAGATTGGAAAATTGAAGACATTGAAAGAGCTTTATATTGGGTACTTTAATACTTACTCCGGTGGGATACCGCCGGAGATCGGAAACTTGTCGGCGTTGGTTCGTTTTGATGCTGCTTACTGTGGAATCTCTGGTGAGATTCCGGCGGAGATAGGGAAGCTTCAGAAACTTGATACGTTGTTTCTTCAAGTCAATGCGCTTTCTGGGTCTTTAACTTCTGAGCTTGGGAATTTGAAGAGCTTGAAATCTATGGATTTGTCGAACAATGCACTTTCCGGTGAGGTTCCGGCGAGTTTTTCGTTGCTAAAGAACTTAACTTTGTTAAACCTGTTCAGGAACAAGCTTCATGGCGCGATACCTGAGTTCATTGGTGAGCTTCCAGATTTGGAAGTGTTGCAGCTTTGGGAGAACAACTTCACTGGGAGAATTCCACGGAGTTTGGGGCAAAATGGGAAACTCACACTTGTTGATCTTTCTTCTAATAAGTTAACTGGGTCACTTCCTCCTGATTTGTGTTTTGGGCACAAGCTTCAGACTTTGATTACTCTTGGGAATTTCCTTTTTGGTTCTATTCCTGATTCGATTGGAAAGTGTGAATCTTTGACTAGGATTCGTATGGGAGATAATTTTTTGAACGGTTCTATCCCAAAAGGGCTTTTAGGTCTTCCAAAATTAACCCAAGTTGAGCTTCAGGGTAATTTTCTATCAGGGAATTTTCCCGAGTCTGGTTCAATGTCTCCAAATCTTGGTCAAATTACCCTTTCTAATAACAAGCTTTATGGGCCTTTGCCACCTACTATTGGTAACTTCACCAGCATGCAAAAGCTTCTTCTTGATGGTAACAAGTTTTCAGGTCCAATCCCTCCTCAGATTGGGAAGTTGCATCAGCTTTCAAAGATAGATTTTAGCCATAACAACTTTTCTGGTCCTATTGCGAAAGAGATTAGTCATTGTAAGCTTTTGACCTTTTTTGATCTTAGCCGAAATGAGCTCTCTGGTGAGATTCCTAATGAGATTAAAAACTTGAGGATATTGAATTATTTGAACCTTTCAAGAAACTATTTAGTTGGTCCCATTCCAGGGTCTATTGCTGCCATGCAAAGTTTAACTTCTGTTGATTTTTCATATAACAATCTATCTGGTTTGGTTCCTGGTACTGGCCAATTCAGCTATTTTAACTATACCTCTTTCCTTGGAAACCCTGAACTTTGTGGCCCTTATTTGGGTCCTTGCAAGGATGGGGTTGTCAATGGCCCTCAGCACCCTCATGTTAAAGGACCATTGTCTCCTTCTTTGAAGCTATTGCTTGTTATTGGTCTGCTTGTGTGCTCTGTCGCATTCGCAGTTGCAGCGATACTCAAAGCTCGGTCGTTGAAGAAGGCCGGTGGTGCTCGGACGTGGAAATTGACTGCATTCCAACGTTTGGATTTCACTGCAGATGATGTTTTGGATTCCTTGAAGGAGGAAAACATTATAGGGAAAGGAGGTGCGGGTATTGTGTATAAGGGTGCAATGCCGAACAAAGATCTTGTTGCAGTGAAAAGGTTACCAGCTATGAGCAGAGGCTCTTCACATGATCATGGTTTCAATGCTGAGATTCAGACTTTGGGACGAATTCGACACAGGTACATTGTTAGATTGTTGGGTTTTTGCTCAAACCATGAGACAAATCTATTGGTCTATGAATATATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGGCATTTGCTTTGGGATACAAGGTATAAAATTGCCGTCGAGGCTGCAAAGGGGCTTTGCTATCTACATCATGATTGTTCGCCACTTATTGTTCACCGTGATGTGAAATCGAACAATATCCTTCTGGATTCCAACTTTGAAGCCCATGTTGCTGATTTTGGGCTTGCTAAATTCCTTCAAGATTCTGGAACATCTGAATGTATGTCTGCTATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACATTGAAGGTTGATGAGAAAAGCGACGTGTACAGCTTTGGTGTGGTTCTTTTAGAGCTTGTAACTGGAAGGAAACCGGTTGGAGAATTTGGTGATGGTGTAGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCAATTCCGATCGAAGAGGTGATGCATGTGTTCTATGTAGCCATGCTGTGTGTTGAAGAACAAGCAGTAGAGAGACCAACTATGCGTGAAGTTGTTCAAATTCTGACCGAGCTTCCAAAGCCACCTGGTTTCAAACAAGGAGACTCGACGATCACTGAATCTTCTTTGACATCATCGAATGGTTCCGAGTCTCCAAACACAGCATCATCTAAGGAACCTAATGATCAAGAACATCCTCCTAAGTCATCACCACCTGATCTTTTTAGCATTTGA 3054 0.4355 MQLLLLPLLLHFLHHFHNPTTAHTLSEHHSLLSFKSTSITSDPTHFLSSWTPNTHYCTWPGITCDSSNHHVTTLNLTSLSLSGTLTTLHLPFLSTLSLADNMFSGPVPLSLSSLNFLIHLNLSNNNFNSTFPPQLSNLQNLQVLDFYNNNMTGPLPVSVTNMTSLKHLHLGGNFFSGQIPPEYGNWRKIEYLAVSGNELAGTIPPEIGKLKTLKELYIGYFNTYSGGIPPEIGNLSALVRFDAAYCGISGEIPAEIGKLQKLDTLFLQVNALSGSLTSELGNLKSLKSMDLSNNALSGEVPASFSLLKNLTLLNLFRNKLHGAIPEFIGELPDLEVLQLWENNFTGRIPRSLGQNGKLTLVDLSSNKLTGSLPPDLCFGHKLQTLITLGNFLFGSIPDSIGKCESLTRIRMGDNFLNGSIPKGLLGLPKLTQVELQGNFLSGNFPESGSMSPNLGQITLSNNKLYGPLPPTIGNFTSMQKLLLDGNKFSGPIPPQIGKLHQLSKIDFSHNNFSGPIAKEISHCKLLTFFDLSRNELSGEIPNEIKNLRILNYLNLSRNYLVGPIPGSIAAMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVVNGPQHPHVKGPLSPSLKLLLVIGLLVCSVAFAVAAILKARSLKKAGGARTWKLTAFQRLDFTADDVLDSLKEENIIGKGGAGIVYKGAMPNKDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRYIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSIPIEEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGFKQGDSTITESSLTSSNGSESPNTASSKEPNDQEHPPKSSPPDLFSI 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0785 1017 Gene3D Ribonuclease Inhibitor 132 221 IPR032675 -
Lal23g0785 1017 MobiDBLite consensus disorder prediction 969 1017 - -
Lal23g0785 1017 Gene3D Phosphorylase Kinase; domain 1 670 768 - -
Lal23g0785 1017 Gene3D Transferase(Phosphotransferase) domain 1 769 975 - -
Lal23g0785 1017 SMART LRR_typ_2 331 355 IPR003591 -
Lal23g0785 1017 SMART LRR_typ_2 283 306 IPR003591 -
Lal23g0785 1017 SMART LRR_typ_2 114 138 IPR003591 -
Lal23g0785 1017 SMART LRR_typ_2 571 594 IPR003591 -
Lal23g0785 1017 SMART LRR_typ_2 356 379 IPR003591 -
Lal23g0785 1017 SMART LRR_typ_2 162 185 IPR003591 -
Lal23g0785 1017 MobiDBLite consensus disorder prediction 974 1000 - -
Lal23g0785 1017 Pfam Protein kinase domain 692 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0785 1017 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lal23g0785 1017 Gene3D Ribonuclease Inhibitor 26 131 IPR032675 -
Lal23g0785 1017 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1002 - -
Lal23g0785 1017 SUPERFAMILY RNI-like 74 385 - -
Lal23g0785 1017 Gene3D Ribonuclease Inhibitor 222 327 IPR032675 -
Lal23g0785 1017 SUPERFAMILY L domain-like 357 616 - -
Lal23g0785 1017 ProSiteProfiles Protein kinase domain profile. 691 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0785 1017 SUPERFAMILY Protein kinase-like (PK-like) 686 962 IPR011009 -
Lal23g0785 1017 Gene3D Ribonuclease Inhibitor 331 620 IPR032675 -
Lal23g0785 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Lal23g0785 1017 SMART serkin_6 691 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g0785 1017 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0785 Lal-Chr23 10383888 10387812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g0785 14 992 Receptor kinase-like Gene Family AT5G65700 78.499 0.0 1540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal23g0785 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0785 - - gmx:100499646 1623.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0813 15 5934347 5938237 Lal23g0785 23 10383888 10387812 LSH
Lal16g0844 16 5464810 5468856 Lal23g0785 23 10383888 10387812 PCT
Lal15g0813 15 5934347 5938237 Lal23g0785 23 10383888 10387812 PCT
Lal23g0785 23 10383888 10387812 Lal16g0844 16 5464810 5468856 PCT
Lal23g0785 23 10383888 10387812 Lal15g0813 15 5934347 5938237 PCT